Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00037 atggcAGGCATGAaggatatgacacaagaaattgAACTTCCGGGCTTCCGATTTCACCCCACCGAAGAAGAACTGCTTGAGTTTTATCTCAAGAACATGGTTGTTGGCAAGAAATTGGGTTTCGACATCATTGGTTTTCTCAACATCTATCACCATGATCCTTGGGCTTTGCCTGGTCTGGCACGGGTTGGGGAAAGAGAATGGTACTTCTTCGTGCCGAGGGACAAAAAGCATGGCAGCGGAGGAAGGCCGAACCGGACCACTGAGAAAGGGTTCTGGAAAGCCACCGGTTCGGACCGGAAAATTGTCAGCTTATCGGAGCCGAAGCGGATCATCGGGTACAGGAAAACCTTGGTTTTCTACGAGGGAAGAGCTCCACGTGGAACCAAGACCGATTGGGTTATGAATGAATACCGCTTGCCTGACACTTGCCACTTGCGTAAGGACATAGTGTTGTGCAAGATATACAGAAAGGCAACTTCGTTGAAAGTGCTGGAGCAAAGGGCAGCAATGGAGGAAGAGACGAAGCAACTCGGGGGATCCCCTTCTTCCTCCACGGAAACAATCTCATTTAATGGCCAAAGCCAACATGAAGATCGAAACGCTTCCATGGCCTCACAGGTGCAACATGTCGTTCTTAAGAAAGAAGCTGATGAGGATATGTTGCTGCaccaacaacaaaataataccATTGAATTGCATAATATCCAAGAGAAAGACAACGACGTCAAAGACACCAAAACGACATTACAGTTGCCACCCGGCATCGACAAGTTGTCGGAGCTCCAAGTACCCACAATCAACATGGATTGGACTCAAGATCAATTTTGGACTCAATTAACCAGTCCATGGTTGCAAAATCTGACTCCTAACTACTCCAACATCCTAAACTTCTATTA 899 0.4505 MAGMKDMTQEIELPGFRFHPTEEELLEFYLKNMVVGKKLGFDIIGFLNIYHHDPWALPGLARVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVSLSEPKRIIGYRKTLVFYEGRAPRGTKTDWVMNEYRLPDTCHLRKDIVLCKIYRKATSLKVLEQRAAMEEETKQLGGSPSSSTETISFNGQSQHEDRNASMASQVQHVVLKKEADEDMLLHQQQNNTIELHNIQEKDNDVKDTKTTLQLPPGIDKLSELQVPTINMDWTQDQFWTQLTSPWLQNLTPNYSNILNFY 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00037 299 Pfam No apical meristem (NAM) protein 14 140 IPR003441 GO:0003677|GO:0006355
Bva03g00037 299 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 298 - -
Bva03g00037 299 Gene3D NAC domain 21 162 IPR036093 GO:0003677|GO:0006355
Bva03g00037 299 ProSiteProfiles NAC domain profile. 12 158 IPR003441 GO:0003677|GO:0006355
Bva03g00037 299 MobiDBLite consensus disorder prediction 177 200 - -
Bva03g00037 299 MobiDBLite consensus disorder prediction 173 200 - -
Bva03g00037 299 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 5 298 - -
Bva03g00037 299 SUPERFAMILY NAC domain 12 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00037 Bva-Chr3 276215 277853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00037 7 299 NAC Transcription Factor Family AT2G17040 59.864 1.38e-121 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva03g00037 NAM 5.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00037 - - adu:107477264 410.223