Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00028 ATGGGTGGCTCAAAGGATAATCTGGGTCTGGTGATGCCCTCCTTAAATCTTCAAGGCGGTTCAAGAATGGAGGACATCAAGCTTGCGAAGGAGATGAGACACAATCCTCGGCGGGCTCTGAGCAATATCAATCAGAATATTGTGGAGGCTATTCATAAACCCTTCGTGGTTAACAAAAGAGATCTTTCCGGGAGAGTTACAGCACAGACGGATCAGCACTGTCCTGAGgaaattaagaaatcaaaccCATTGGAGAGGAAACCCAGTTATGAGTTAGATTGTTTAATCATAGATGTGGAAGAATATGAGGATGCCAGTGACAATGCAGTTCCAGAGTTTGTGAAGCACACCGAAGCAATGCTAGAGGAAATTGACAGAATAGAGGAAGTGGAAATGGAAGATGTGGAGGAACCTGTTATGGACATCGACAGCTGTGATAGGAATGATCCACTTGCAGTTGTTGAGTACATAGATGACATCTATGAATTTTACAAGAAAACTGAGAACTCTGGCTGTGCATGTCCAAATTACATGACTCGTCAAACTGACCTCAATGAGAAGATGAGGGCTATACTTATTGACTGGCTTATTGAGGTCCACTACAAATTTGAGCTTATGGAGGAGACATTGTTCCTCACTGTAAACCTGATAGACAGGTTTTTGGAGCATCGGGTTGTGCTCAGAAAGAAACTTCAATTGGTTGGGGTGACAGCCATGCTTATAGCTTGCAAGTACGAGGAGGTTTCAGTTCCCACTGTTGAGGATTTTGTCCTGATAACTGACAAGGCATACACAAGGAATGAAGTCCTGGACATGGAAAAATTAATGCTGAACACGTTACAATTCAATATGTCTGCGCCTACCCCATATGTTTTCATGAGGAGATTTCTCAAGGCAGCTCAATCTGACAAAAAGCTCTCGCTTCTGTCCTCCTACATGATTGAGCTTTGCTTGGTTGAATACAAGATGCTCAAGTTTCCACCATCTTTGCTAGCTGCTGCAGCCATCTACACAGCTCAGTGTAGCCTTTACCAGTTTAAGCAATGGACTAAGACCAGTGAATGGTACACAGCCTATTCAGAAGAGCAGCTTCTAGAATGCTCACGAGAGATGGTTACTTTCCATCAGAAGGCTGGAACAGGAAAACTCACTGGAGTTTTCAAGAAGTACATTACGTGGAAGTATGGATATGCAGCAAAAATGCAACCAGCACTGTTTCTTCTGGATTA 1229 0.428 MGGSKDNLGLVMPSLNLQGGSRMEDIKLAKEMRHNPRRALSNINQNIVEAIHKPFVVNKRDLSGRVTAQTDQHCPEEIKKSNPLERKPSYELDCLIIDVEEYEDASDNAVPEFVKHTEAMLEEIDRIEEVEMEDVEEPVMDIDSCDRNDPLAVVEYIDDIYEFYKKTENSGCACPNYMTRQTDLNEKMRAILIDWLIEVHYKFELMEETLFLTVNLIDRFLEHRVVLRKKLQLVGVTAMLIACKYEEVSVPTVEDFVLITDKAYTRNEVLDMEKLMLNTLQFNMSAPTPYVFMRRFLKAAQSDKKLSLLSSYMIELCLVEYKMLKFPPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTAYSEEQLLECSREMVTFHQKAGTGKLTGVFKKYITWKYGYAAKMQPALFLLD 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00028 409 PANTHER CYCLIN-B2-3-RELATED 33 405 - -
Bva03g00028 409 PANTHER CYCLINS 33 405 IPR039361 -
Bva03g00028 409 ProSitePatterns Cyclins signature. 189 220 IPR006671 -
Bva03g00028 409 Gene3D - 173 285 - -
Bva03g00028 409 SMART Cyclin_C_2 287 404 IPR004367 -
Bva03g00028 409 Pfam Cyclin, N-terminal domain 159 285 IPR006671 -
Bva03g00028 409 Pfam Cyclin, C-terminal domain 287 403 IPR004367 -
Bva03g00028 409 CDD CYCLIN 188 277 IPR013763 -
Bva03g00028 409 SUPERFAMILY Cyclin-like 287 403 IPR036915 -
Bva03g00028 409 SMART cyclin_7 194 278 IPR013763 -
Bva03g00028 409 SMART cyclin_7 291 373 IPR013763 -
Bva03g00028 409 Gene3D - 159 399 - -
Bva03g00028 409 CDD CYCLIN 287 372 IPR013763 -
Bva03g00028 409 SUPERFAMILY Cyclin-like 148 284 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00028 Bva-Chr3 208510 211703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00028 5 408 Core Cell Cycle Gene Families AT1G20610 58.974 3.93e-171 484