Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00005 ATGGGGATTTGCTGGGGTTCACCAGCCCGCAACCCAACCCCAACCCCATCCACAACCACTACCACAACCATAGCCACAACAGGTCATCTTAATGCAGGGACGACAGGAACATCCCAGACGTCCAGCAATACTACATCTTCGGGAAGTGGTAAAGACTCCTTATATAGCCAATTCTCGGTGTCTAGCGGCGACGAAGCTTATCTAAATGGGCAGATCTTACCTAGTGCAAATTTGAGGATATTTACTTTTGCCGAATTGAAGGCTGCAACTAAGAATTTTAAAGCTGACACCGTATTGGGAGAGGGGGGTTTTGGAAAAGTCTTCAAGGGTTGGCTTGAAGAGAAGGCAGCGTCAAAAAATGGAAGTGGAACAGTCATTGCCGTCAAAAAGTTGCATTCGGAGAGCCTACAAGGATTTGAGGAGTGGCAGTCAGAAGTAAACTTTTTAGGACGCCTATCTCATCCTAATCTTGTAAAGCTATTGGGATACTGTTGGGAGGAAACCGAGCTTCTTCTTGTCTACGAATTCATGCAAAAAGGAAGTTTGGAAAATCATCTCTTTGGAAGAGGCTCTGCCGTTCAACCACTTCCTTGGGACATAAGACTTAAGATTGCCATTGGAGCAGCTCGTGGCTTGGCATTCTTGCACACATCTGAGAAAGTAATTTACAGAGATTTCAAGGCCTCAAATATATTGCTTGACGGATCCTATACTGCCAAGATATCAGACTTTGGTTTGGCAAAGTTGGGTCCTTCAGCTAGTCAATCCCATGTGACAACAAGGGTGATGGGCACATATGGTTATGCAGCTCCTGAGTATGTGGCCACAGGGCATTTGTATGTAAAGAGTGACGTGTATGGATTTGGAGTTGTTTTGGTTGAAATACTAACAGCCTTAAGGGCACTTGATACCAACCGTCCAAGTGGGCAACATAGTCTTGTGGACTGGATCAAACCATACCTACAAGacagaagaaaattgaagagcaTTATGGATTCTCGGTTGGAGGGGAAATATCCATCAAAAGCTGCATTTCGTATAGCTCAGCTTGCCTTGAAATGTCTTGCATCGGAGCCCAAACAACGGCCATCGATGAAGGAAGTTTTGGAAAGCTTGGAGCGGATTGAAGCAGCCAATGAGAAGCCTGTTGAGCCCGGATTCCGTTCTACAAACACCACACCTAACCGTCGACGTCAGCAGCCTTCGCATCATCGTTCCTCGCTTCATCCAAAGCGTGAGGGAAGTTGGTCCTATCAAAACTCTCCTAGAGTAAGGGCCGTATG 1283 0.4544 MGICWGSPARNPTPTPSTTTTTTIATTGHLNAGTTGTSQTSSNTTSSGSGKDSLYSQFSVSSGDEAYLNGQILPSANLRIFTFAELKAATKNFKADTVLGEGGFGKVFKGWLEEKAASKNGSGTVIAVKKLHSESLQGFEEWQSEVNFLGRLSHPNLVKLLGYCWEETELLLVYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTALRALDTNRPSGQHSLVDWIKPYLQDRRKLKSIMDSRLEGKYPSKAAFRIAQLALKCLASEPKQRPSMKEVLESLERIEAANEKPVEPGFRSTNTTPNRRRQQPSHHRSSLHPKREGSWSYQNSPRVRAV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00005 427 MobiDBLite consensus disorder prediction 377 427 - -
Bva03g00005 427 MobiDBLite consensus disorder prediction 412 427 - -
Bva03g00005 427 Gene3D Transferase(Phosphotransferase) domain 1 177 392 - -
Bva03g00005 427 CDD STKc_IRAK 99 375 - -
Bva03g00005 427 Pfam Protein tyrosine and serine/threonine kinase 95 372 IPR001245 GO:0004672|GO:0006468
Bva03g00005 427 Gene3D Phosphorylase Kinase; domain 1 77 176 - -
Bva03g00005 427 PANTHER BNAA09G08980D PROTEIN 11 407 - -
Bva03g00005 427 ProSitePatterns Protein kinases ATP-binding region signature. 99 130 IPR017441 GO:0005524
Bva03g00005 427 PANTHER OS01G0588500 PROTEIN-RELATED 11 407 - -
Bva03g00005 427 MobiDBLite consensus disorder prediction 1 51 - -
Bva03g00005 427 ProSiteProfiles Protein kinase domain profile. 93 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00005 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Bva03g00005 427 SUPERFAMILY Protein kinase-like (PK-like) 68 372 IPR011009 -
Bva03g00005 427 MobiDBLite consensus disorder prediction 10 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00005 Bva-Chr3 29535 32999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00005 64 398 Receptor kinase-like Gene Family AT4G02010 47.941 2.74e-103 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva03g00005 PK_Tyr_Ser-Thr 6.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00005 - - gmx:100810856 652.129