Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02680 ATGAAATTACAGGCACATATTCCTGGGCAGATATCAGGGCAGTTACCTACTCAAGCAGTGTCTCAATTGCCCGGGCTGTCCCAGACAAATGGAAGTACCCTCCCTCCCCAGATGTCAAATTTAGGTGGTGTTTCTCGCCCAGCAATTAATATGGACCCTGAACTTCTTAGAGCACGCTCCTTCATGCAAGAGAAGATCTTTGATATGTTGGTGCGGAACCAGCCGCAGCCAGTTTCAGATTTGCAGAAGAGGAAGTTTAAGGATCTAGCAAAACGGCTGGAGGAGGCCCTGTTCAAAGCTGCTCTCACTAAGGAGGATTATACAAACATGGAGACATTGGAGAGCCGTTTGTTTAGTTGCATTAAGTCACTCAATAATCACAACCAACAACATCCACCGCTTGTCAGCTCTTCTCCAATCGGTGCAATGATACCAACCCCTGGTATGTCACACATCACTTCAAACATGGGGGTTGCCTCATCCTTGGATGGCTCAATGGTTGCTCCCAGCGGATGCCATAGTGTAGCACCTACATCTGTCAATGCTGGAAGCATGTTACCAACTGCTGGCATGCATGGTAATTCCATGAATAGATCTGATGGCGCTTTCTCTAATTGCTACCAGCAGCCTTCTAGCGGCTTTTCCATTGGTTCGGGGGGAAACATGTCATCAATGGGCATGCAGAGAATTGCAAGCCAAATGATTCCCACTCCCGGATTTAGTGGCAGCACTAATCATTCATATATGAATGTGGAGTCTTCTACTAATAGCAGTGCATTTTCAACTGTTGAATCTTCACTACTATCACAACCACAGCAACAGAAGCAGCATGTCAGTGGCCAAAACAGCAATTTATTGCAGAACATTGGCAGTCAACTAGGCAGTGGTATCAGATCTGGTTTGCAACAGAAATCTTTTGCATTCACAAATGGTTCAATAAATAGTGGGTTAGGCTTGATTGGAAGCAATATACAGCTTGTGAGTGAAGCTGGCACTTCTGATGGCTATTTGAATGCCACATCATACACTAACTCTCCCAAACACTTGCAGCAGCATTTTGATCAACATCAGCAGCCACTAGTGCAAGGTGATGGATATGGATCGACTAATGTTGACTCTCTTCCTTCTGGAAATTTGTACACCACTGCAACATCCTCTGGATCTATAATGAACTCCCAGACCttgaattcattaaaattaccGTTACTAACCAAGCCCAGCACTCTATTAAGTAGTCAGTCCAATCTGCATGGCATGCAACAGGCTTCTCATCTAAAATCTCAAGCAATTAATCAGTTGAACTTTCAGCCTTCATTGTCTTCAAGAGATAGCATTGTACATCCTCAACAGCATTATCAGCAACAGGTCCCACAATTTCAACAGCCAGAGCAGTACTCTCAACAGCAATACCAATCAAAGCTGCAAAGTCAGCAGCCTCAGCATCTAGTTAGTAATGACACTTTTAGTCAGTCTCAGCTCATTTCTAATCCAGACAGCAGAGTGAAGTCAGAGCCTGGAGTGGAGCAGCAAAAAGAAGCAATCAATTCTCAGGTTTGTGAACAGTTTAAGCTGCCTGAGATGCAGAATCAGTTGCAGCAAAACCCTTCTGAAGACTGCTCTAGGGGTGTCCAACATGTTTCTTTTCCAACAGCTCAGCATGATATATGTTCATCAGCACCTCAAAATGCACAACAAATGCAACAAATGTTGCGCTCACATCAGTTGGTTTCAGAgtctcaaaataattttagcgGTCTTCCGGTTGGTGCACAATCCAAATCAGTACCAATATGTCAATGGGATCCTCAATCACAAGATGGTGGCCACATATCAGGGAATATGTCCAATGAGCACCAGATCCATATGGAATTTCACGAACGAATATCAGGGCAAGATGAAGCTCAGTGCAACAATCTACCATCAGATGGGTCTATTATTGGTCAAGCTATTGCTTCTAGAGGTGCAACTGAGCTGCAGGACTCTGCAGCTTCTGTCAAGAAGCTGCAGCATAGGAATCAACAAAGAtggcttttatttattcttcatGCGCGAAGATGTCCTGCCCCTCAAGGACAATGCCAAGAACGTTATTGTTTAAATGTTCAGAGATTGTGCAAACACATAGAGCGATGCACCATGTCTGATTGTCCATATCCCCGTTGTCATTATACTAAGTTATTGTATATCCATTTCAGAAGTTGCAAGGATTCACATTGCCCAGTTTGTGTTCCTGTAAGATATTTCTGGCACGCATGCCAACTTAAACCTCAGATTAGGGCAGATACTGATTCAGGGTTGCCAATTGAAGTAACTGGATCCTGTAAATCCCATAATGCTGTGGATCCTCAACCTAGATTGATCTCAAAGCCTCCAACAGTGGTTGAAACTTGTGAAGACGTACAACCATCCCTAAAACGAATGAAGATAGAGCAGTGCGCCCAGTCCTTTAATCCTGATCACAACAATTCTGCTAAATTGGTTTCATCAAATGGTGAATCTCATGTTTCCAAGGACATCCAATCCCAGGACTATCCAAGTGGCAACTCATCCATGTCAATTAAATCTGAGCTTACAGATATTAAGGTGGAAGTTTCGCTAAATTCCATACACGAAGGTCATGGTGTCCTTAAAACAGATAATGCCGATGATAGAAGTTCCGGTGGTGAGCCTGTCACACGTGACGAGACTGCTAATGTAGCTAGGCcagaaaatgttaaaactgAGACAGAAGCTGGAcaagaaaagcaagaaaatgtgATTCAACCACCTGAAAATGTATCTGGAACCAAGTCAGGTAAGCCCAAAATAAAGGGGGTGTCATTGACTGAATTATTTACTCCAGAGCAAGTCAGGGAACACATATCTGGCCTGAGGCAGTGGGTTGGCCAAAGCAAAGCAAAAGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCCTGTCAGTTGTGTGCAGTTGAGAAGCTAACATTTGAACCACCGCCTATATATTGCTCAACATGTGGAGCCCGCATTAAACGCAATGCTATGTATTATACCATGGGTGCTGGTGACACACGGCATTATTTTTGCATTCCATGCTATAATGAAGCCCGGGGGGATACCATTGTTGTTGATGGGATGGCCATTCCTAAGGCAAGgctggaaaagaagaaaaatgatgagGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAACATCAAATTTGTGCCTTATTTAATGGTCGAAGAAATGATGGGGGCCAAGCTGAATACACTTGCCCAAACTGCTATATTCAGGAAATGGAAAGGGGGGAGCGCAATCCCTTACCCCAAAGTGCTGTTCTTGGGGCCAAGGATTTGCCAAGAACTATCCTCAGTGACCACATTGAACAACGGTTATTTAGACGACTAAAGCAAGAAAGACAAGAGAGGGCAAGGCatcaaggaaaaaattatgatgagGTGCCTGGAGCTGAAGCACTTGTGGTTAGAGTTGTGTCGTCTGTTGACAAAAAGCTAGAAGTGAAACAGCGctttttggaaattttccAGGAAGAAAATTACCCAACAGAATTCCCATATAAATCTAAGGTAATTCTATTGTTTCAGAAGATTGAAGGTGTTGAAGTTTGCCTATTTGGCATGTATGTTCAAGAATTTGGATCTGAATGTCAGTTTCCTAATCAGCGTCGAGTGTATCTGTCATATTTGGACTCTGTGAAGTATTTTAGGCCTGAGATCAAAGCAGTAACTGGAGAGGCTCTTCGGACGTTCGTTTACCATGAAATTTTGattGGATACCTTGAATATTGCAAGAAACGTGGTTTTACAAGTTGCTATATATGGGCCTGTCCTCCATTAAAGGGTGaagattacattttatattgtCATCCAGAAATTCAGAAGACTCCAAAGTCTGACAAGCTTCGGGAATGGTACCTGGCAATGTTGAGAAAAGCTGCAAAGGAGAATATTGTGGTTGATTTGACTAACTTATATGACCATTTCTTTGTATCTACTGGTGAATGTAAAGCTAGGATTACTGCTGCAAGACTACCATATTTTGATGGTGACTACTGGCCCGGTGCTGCAGAGGATTTGATTTACCAGCTTCGCCAAGAAGAAGATggcagaaaacaaaataagaaaggaaCAACTAAAAAGACTATAACAAAAAGGGCTTTGAAAGCTTCTGGTCAATCAGATCTTTCTGGAAATGCATCCAAAGATCTGCTACTAATGCATAAACTCGGTGAAACCATCTGCCCGATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCATGCACTCACTGTTGTATTCTAATGGTGTCGGGAAACCATTGGGTTTGCAATCAATGCAAGAACTTTCAGATTTGTGATAAGTGTTACGAAGCTGAACAGAAGCGTGAGGAGAGAGAAAGGCATCCTACTAATCAGAGGGAAAAACATACCCTTTATCCAGTTGAAATTACCGATGTACCAGTTGATACAAAGGACAAAGATGATATTCTTGAGAGTGAATTCTTTGACACTAGACAGGCATTCTTGAGCCTGTGTCAGGGTAATCATTATCAGTATGATACACTAAGGCGGGCCAAGCATTCCTCAATGATGGTCCTTTATCATCTCCATAATCCAACAGCTCCTGCATTTGTCGCAACTTGTAATACATGCTATCTTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCTGAATATGATGTATGCAATGCTTGTTATCAAAAAGATGGGGGCATTGATCATCCTCATAAGTTGACTAACTCAATAGCTGACCGTGATGCTCAGAACAAAGAAGCTAGGCAGCTTCGAGTATTGCAGCTACGCAGAATGCTTGATCTTCTTGTGCATGCATCCCAATGTCGTTCTGCACATTGCCAGTATCCAAATTGCCGCAAGGTGAAGGGGCTTTTCCGCCATGGGATACAATGCAAAACACGTGCTTCTGGAGGCTGTGTTCTTTGTAAGAAAATGTGGTATTTGCTTCAACTCCATGCTCGTGCTTGCAAAGAATCTGAGTGCCACGTACCACGTTGCAGAGATTTGAAAGAACATTTAAGGCGGTTGCAGCAGCAGTCTGATTCACGGCGGAGAGCAGCGGTGATGGAGATGATGAGACAGAGAGCTGCAGAAGTTGCCAACAATGCCGGATG 5189 0.4186 MKLQAHIPGQISGQLPTQAVSQLPGLSQTNGSTLPPQMSNLGGVSRPAINMDPELLRARSFMQEKIFDMLVRNQPQPVSDLQKRKFKDLAKRLEEALFKAALTKEDYTNMETLESRLFSCIKSLNNHNQQHPPLVSSSPIGAMIPTPGMSHITSNMGVASSLDGSMVAPSGCHSVAPTSVNAGSMLPTAGMHGNSMNRSDGAFSNCYQQPSSGFSIGSGGNMSSMGMQRIASQMIPTPGFSGSTNHSYMNVESSTNSSAFSTVESSLLSQPQQQKQHVSGQNSNLLQNIGSQLGSGIRSGLQQKSFAFTNGSINSGLGLIGSNIQLVSEAGTSDGYLNATSYTNSPKHLQQHFDQHQQPLVQGDGYGSTNVDSLPSGNLYTTATSSGSIMNSQTLNSLKLPLLTKPSTLLSSQSNLHGMQQASHLKSQAINQLNFQPSLSSRDSIVHPQQHYQQQVPQFQQPEQYSQQQYQSKLQSQQPQHLVSNDTFSQSQLISNPDSRVKSEPGVEQQKEAINSQVCEQFKLPEMQNQLQQNPSEDCSRGVQHVSFPTAQHDICSSAPQNAQQMQQMLRSHQLVSESQNNFSGLPVGAQSKSVPICQWDPQSQDGGHISGNMSNEHQIHMEFHERISGQDEAQCNNLPSDGSIIGQAIASRGATELQDSAASVKKLQHRNQQRWLLFILHARRCPAPQGQCQERYCLNVQRLCKHIERCTMSDCPYPRCHYTKLLYIHFRSCKDSHCPVCVPVRYFWHACQLKPQIRADTDSGLPIEVTGSCKSHNAVDPQPRLISKPPTVVETCEDVQPSLKRMKIEQCAQSFNPDHNNSAKLVSSNGESHVSKDIQSQDYPSGNSSMSIKSELTDIKVEVSLNSIHEGHGVLKTDNADDRSSGGEPVTRDETANVARPENVKTETEAGQEKQENVIQPPENVSGTKSGKPKIKGVSLTELFTPEQVREHISGLRQWVGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGAGDTRHYFCIPCYNEARGDTIVVDGMAIPKARLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEMERGERNPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQERQERARHQGKNYDEVPGAEALVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEIKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKENIVVDLTNLYDHFFVSTGECKARITAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHACTHCCILMVSGNHWVCNQCKNFQICDKCYEAEQKREERERHPTNQREKHTLYPVEITDVPVDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVATCNTCYLDIETGQGWRCEVCPEYDVCNACYQKDGGIDHPHKLTNSIADRDAQNKEARQLRVLQLRRMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02680 1729 PANTHER HISTONE ACETYLTRANSFERASE HAC12 128 1727 - -
Bva02g02680 1729 ProSiteProfiles Zinc finger ZZ-type profile. 1553 1610 IPR000433 GO:0008270
Bva02g02680 1729 ProSiteProfiles Zinc finger TAZ-type profile. 666 745 IPR000197 -
Bva02g02680 1729 SMART KAT11_2 1148 1445 IPR013178 GO:0004402|GO:0006355|GO:0016573
Bva02g02680 1729 MobiDBLite consensus disorder prediction 234 253 - -
Bva02g02680 1729 ProSiteProfiles Zinc finger TAZ-type profile. 1611 1694 IPR000197 -
Bva02g02680 1729 SMART TAZ_2 667 745 IPR000197 -
Bva02g02680 1729 SMART TAZ_2 1614 1692 IPR000197 -
Bva02g02680 1729 MobiDBLite consensus disorder prediction 816 852 - -
Bva02g02680 1729 PANTHER CBP/P300-RELATED 128 1727 IPR013178 GO:0004402|GO:0006355|GO:0016573
Bva02g02680 1729 Gene3D - 993 1053 IPR038547 -
Bva02g02680 1729 Pfam Histone acetylation protein 1156 1376 IPR013178 GO:0004402|GO:0006355|GO:0016573
Bva02g02680 1729 CDD PHD_HAC_like 1025 1097 - -
Bva02g02680 1729 MobiDBLite consensus disorder prediction 875 890 - -
Bva02g02680 1729 MobiDBLite consensus disorder prediction 445 485 - -
Bva02g02680 1729 ProSitePatterns Zinc finger PHD-type signature. 1026 1097 IPR019786 -
Bva02g02680 1729 SUPERFAMILY RING/U-box 1413 1483 - -
Bva02g02680 1729 Pfam TAZ zinc finger 1621 1691 IPR000197 -
Bva02g02680 1729 Pfam TAZ zinc finger 674 742 IPR000197 -
Bva02g02680 1729 Gene3D TAZ domain 659 748 IPR035898 -
Bva02g02680 1729 MobiDBLite consensus disorder prediction 873 934 - -
Bva02g02680 1729 Pfam Zinc finger, ZZ type 1554 1594 IPR000433 GO:0008270
Bva02g02680 1729 SUPERFAMILY RING/U-box 1534 1597 - -
Bva02g02680 1729 MobiDBLite consensus disorder prediction 262 281 - -
Bva02g02680 1729 Gene3D - 1552 1604 IPR043145 -
Bva02g02680 1729 SMART zz_5 1552 1598 IPR000433 GO:0008270
Bva02g02680 1729 SMART zz_5 1432 1476 IPR000433 GO:0008270
Bva02g02680 1729 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1054 1098 IPR013083 -
Bva02g02680 1729 ProSiteProfiles Zinc finger ZZ-type profile. 1433 1496 IPR000433 GO:0008270
Bva02g02680 1729 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1115 1551 IPR031162 GO:0004402
Bva02g02680 1729 Gene3D TAZ domain 1608 1725 IPR035898 -
Bva02g02680 1729 Pfam PHD-finger 1056 1098 IPR019787 -
Bva02g02680 1729 SUPERFAMILY TAZ domain 669 748 IPR035898 -
Bva02g02680 1729 ProSitePatterns Zinc finger ZZ-type signature. 1558 1585 IPR000433 GO:0008270
Bva02g02680 1729 SUPERFAMILY FYVE/PHD zinc finger 1059 1099 IPR011011 -
Bva02g02680 1729 MobiDBLite consensus disorder prediction 914 928 - -
Bva02g02680 1729 SUPERFAMILY TAZ domain 1613 1696 IPR035898 -
Bva02g02680 1729 MobiDBLite consensus disorder prediction 1379 1403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02680 Bva-Chr2 24686434 24697378 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Bva02g02680 HAT_KAT11 1.5e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02680 K04498 - gmx:100809207 2586.99