Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02673 ATGCACCACAACCTTGCTGGGTTGTGGATTGCTGTCCTCGCGGTACTGACCGCCGCAGTTCATTGCAAGACAAACTCCAAAGATGTTGAAGCTCTTAATGTGATGTATAAGAGCTTGAATTCTCCTTCGCAACTGAGTGGCTGGAAATCCAGTGGAGGCGATCCTTGTGGCGACTCATGGGAAGGAATCAAATGCTCAGGCTCATCTGTCACAGACATAGATTTATCTGGCCTCGGGCTTCGTGGAACAATGGGCTACCAGCTGAACAGCTTAACATCTGTCACTTCCTTTGACTTGAGCAACAACAATCTCAATGGTGAAATACCGTATCAGCTTCCACCTAATACTCGTTTCCTGGATCTTTCTAAGAATCAGTTCACTGGAAATGTGCCTTATTCAATTTCTCAGATGACCGATCTCGATCACctAAATCTTGCTCATAATCAGCTCAAGAATCAGTTGGGTGATATGTTTAAGAAACTCACTAAACTCAAACAACTGGATTTATCGTTCAATCAACTGTCAGAAAGCTTGCCTCAGAGTTTCAAATCGCTCTCAAGTCTCAAGAAGTTGCATttgcaaaataatcaattctcTGGTACAATAAATGTCATTGCCAATCTTCCAATCGAAGATTTGAATgttgaaaataacaaatttactgGTTGGATTCCTGAGGAGTTAAAGGATATAGACAGCTTGCAAACTGGAGGAAACTCTTGGTCTACAGGGCCAgcacctcctcctcctcctggTACACCCCCTATAAAACATGCTGAGAAACACCACAGTGGGAAATCTCTTGTCACTGGGCTAGCCATAGCAGGAGTAATTTTGGCTGTACTTGCAATTACTATTATTGCCATtgcttttttcaaaagaagatCAGATTCATTTTTGCCTTCGTCACATTTTCTTGACGAAGAGAGACGTAGCCGGCGTTCATCTTTTGCCCCCCTTGCCTCTCGGGAATTGTCAAGACGCTCTGGTGCTGATGCAGGCAAAGACTTGaaagAATTGAGTCCAGTACTGGATTCTGCTACCATTGACATAAAGGTTTTGCAGAATGAGAAAACTACACCAACCGGTGCAAGGGCGTCAGTGTCCGATAGTGAGTCTGCAAATCGAATGATTGCTACAAGAAGCAACTCGGTACGTGCTACTTCGTTCTCATTGGCAGATTTGCAGGTTGCTACTGCTAATTTTGCATCAGGTCGCCTTCTTGGTGAAGGATCCATTGGACGTGTTTATCGGGCCAAATATTCTGATGGAAAGGTATTGGCTGTGAAAGAGATAGACCCCTCACTTTTCCATGGCGGTCCTCCAGAAGAATTCTCTCAGATTGTTGCAAATATCTCCAAGCTTCACCACCCAAATATTGCCGAGCTTGTGGGTTATATTTCAGAAGACGGGCACAGCATGTTGATATATGAGTATTTCAGGAACGGCTCTCTTCATGAATTCTTACACTTGTCTGATGACTTCAGCAAACCACTCACTTGGAACACCAGAGTCAGAATTGCACTCGGCACAGCTCGGGCTGTTGAGTACCTGCATGAAATCTGTTCTCCATCTTTAGTTCACAGGAATATCAAGTCCTCAAATATTTTGCTTGACTCCGATCTCAATCCTCGTCTCTCAGACTATGGTTTGGCGTCCTTCTATCAGCGGACTAGTCAAAATCTGGGAGCAGGATATAATGCACCAGAGTGCAAAAAACCTTCGGCCTATACCCTGAAAAGTGATGTCTACTGTTTTGGGGTAGTCATGTTGGAACTGTTAACAGGTCGAATGCCTCTAGACAGTTCAAAGCCACAGTCAGAACAATGTCTCGTGGGTTGGGCCTCCCCGCAGCTTCATGACATTGATGCATTGGAAAAAATGGTGGATCCTGCGTTGCGGGGACTTTACCCTCTTAAATCAGTGTCACGATTTGCTGATATCATTGCCCTCTGTGTTCAGTCTGAACCTGAGTTCCGGCCACCCATGTCAGAGGTGGTGCAGGCATTGATGCAATTGGTTCAGCGTTCTAATATGAACATGAGAGAGGATCTTGGCGCTTCTCGTCGGACGGATGATTATGATGTCTG 2090 0.4325 MHHNLAGLWIAVLAVLTAAVHCKTNSKDVEALNVMYKSLNSPSQLSGWKSSGGDPCGDSWEGIKCSGSSVTDIDLSGLGLRGTMGYQLNSLTSVTSFDLSNNNLNGEIPYQLPPNTRFLDLSKNQFTGNVPYSISQMTDLDHLNLAHNQLKNQLGDMFKKLTKLKQLDLSFNQLSESLPQSFKSLSSLKKLHLQNNQFSGTINVIANLPIEDLNVENNKFTGWIPEELKDIDSLQTGGNSWSTGPAPPPPPGTPPIKHAEKHHSGKSLVTGLAIAGVILAVLAITIIAIAFFKRRSDSFLPSSHFLDEERRSRRSSFAPLASRELSRRSGADAGKDLKELSPVLDSATIDIKVLQNEKTTPTGARASVSDSESANRMIATRSNSVRATSFSLADLQVATANFASGRLLGEGSIGRVYRAKYSDGKVLAVKEIDPSLFHGGPPEEFSQIVANISKLHHPNIAELVGYISEDGHSMLIYEYFRNGSLHEFLHLSDDFSKPLTWNTRVRIALGTARAVEYLHEICSPSLVHRNIKSSNILLDSDLNPRLSDYGLASFYQRTSQNLGAGYNAPECKKPSAYTLKSDVYCFGVVMLELLTGRMPLDSSKPQSEQCLVGWASPQLHDIDALEKMVDPALRGLYPLKSVSRFADIIALCVQSEPEFRPPMSEVVQALMQLVQRSNMNMREDLGASRRTDDYDV 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02673 696 ProSiteProfiles Protein kinase domain profile. 402 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02673 696 MobiDBLite consensus disorder prediction 234 262 - -
Bva02g02673 696 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 17 692 - -
Bva02g02673 696 Gene3D Ribonuclease Inhibitor 22 250 IPR032675 -
Bva02g02673 696 Gene3D Transferase(Phosphotransferase) domain 1 480 693 - -
Bva02g02673 696 SUPERFAMILY Protein kinase-like (PK-like) 380 670 IPR011009 -
Bva02g02673 696 SUPERFAMILY L domain-like 24 235 - -
Bva02g02673 696 PANTHER OS01G0253100 PROTEIN 17 692 IPR045271 GO:0004714|GO:0006468
Bva02g02673 696 SMART LRR_typ_2 137 160 IPR003591 -
Bva02g02673 696 SMART LRR_typ_2 161 184 IPR003591 -
Bva02g02673 696 SMART LRR_typ_2 91 119 IPR003591 -
Bva02g02673 696 SMART LRR_typ_2 185 207 IPR003591 -
Bva02g02673 696 Pfam Protein tyrosine and serine/threonine kinase 405 670 IPR001245 GO:0004672|GO:0006468
Bva02g02673 696 Gene3D Phosphorylase Kinase; domain 1 363 479 - -
Bva02g02673 696 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Bva02g02673 696 Pfam Leucine rich repeat 156 198 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02673 Bva-Chr2 24610916 24617722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02673 1 695 Strubbelig Receptor Gene Family AT1G78980 60.770 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Bva02g02673 PK_Tyr_Ser-Thr 2.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02673 - - jre:109004269 964.526