Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02671 ATGCTAATGGGCGCGCGCAGCACCGCTGTCGGGCTTGTGCGCGCACCTGCAGCATTAACATCAAACAATGATGATGATAACAAGTTTGTCAGTAAATTAGTAATGTTCAACGTCATCACAAACGTTAAGGTTGtggttgttgtttttattaacGTGTTACTAGTGTTATCATCATGTGCCCCTGACAGCAGGTTTAACGAGGCGGATGCTCTGTTGAGGTTGAAGGGGTCATTGAACAATGCAGTTCGGCTGGGCAGTTGGGATCCGTCCATAAATCCAAAGCCACCATGCAGTGGGAATCGTAACAACTGGGAAGGCGTGATTTGCGTAGATGACAAGGTATTGGGGTTGCGCCTTGAGAGCATGGGGCTGCATGGCAAAATAGATATAGATTCTCTGGTGGCATTGCCATTTTTGAGGATGTTGAGCTTGATGAACAACACATTTACTGGTTCCATCCCAAGTATAAACATGTTGCACCACTTGAGGTCGATCTACTTATCCTATAATCATTTTTCGGGAGAGATTCCAGACGATGCATTCAAGGGCATGCATAAGCTGAAGAAGGTGTATTTGTCCAATAACGAATTCACGGGTAAAATCCCTTCATCTCTTGCGTCCTTGCCTAATCTCATGCACTTAAGGCTTGACGCAAACAAGTTTCAAGGCCAAATCCCCACTTTCAGCAACGCCACGCGTCTCACGGTCGTCGATTTTTCTAACAACGAATTAGAGGGTTTCATCCCCGACAATCTAAGACCCTTCCCTGCCACCGCCTTTTCGGGGAACGCAAAACTATGCGGAAGGCCTCTGGATTCATCATGCAGCGCAGCAGCCGTAGAGACTCCAGCCAAGACAACAGTTCTGAAGATTTTTCTGATTGTGATGTTAACGGCGGTATTAATAGCCATTCTGGTTGCGGCCTTTATCACTATATTCCGGTTGAGATCATCAAATCAACGGCAACAGATAGTGAGATTGGGAAGTCGTCATGCCGCGGCCATGTCCTCCTCAGCCACCACCCTACCTAATTCAAGCCGAGGTAGCAGCAAGAAATACGCTCCTCCTGTTTATCGTCAACAACAAGCAGCTGGAGTAGTAGATCATCATAAGGTAGCAGTAGGAGCGAGATCATCAGCCTATCATCATCAACAGCAAGCAGCTGCTGGCAAACTGTCCTTCGTCAGGGACGACGACAGACAGAGATTTGATGTGCATGATTTGCTAAAAGCATCCGCTGAAATTTTAGGGAGTGCCACATTTGGATCTTCCTACAAGGCGGTGGTGCTGGACGGCTCTCAAGTGGTGGTGGTCAAGAGGTACAAGCAAATGAACAATGTTGGGAGAGAGGAGTTCCAGGAGCACATGAGAAGGCTCGGCGCACTCTCCCATCCCAATCTCCTCCCTCTTGTGGCCTATTACTACAGGAAGGAAGAGAAGCTCTTGCTCACCGATTTTGTTGACAATGGTTGCTTGGCCAGTCACCTTCATGGTAATCACAACCTTGACAAGCCATGCCTTGATTGGCCAACCCGCTTAAGAATCGTCAAAGGTGTTGCTAGGGGTTTGGCTTACTTATATAGCGCTCTGCCCAGCGTAGTGGTGCCTCATGGACATCTGAAATCTTCCAATGTGCTTTTAGATGAATCCTTTAACCCTCTGCTCACCGATTATGCTCTCATTCCTCTCACCAACATTGACCTTGCACAACAGCAAATGATGCCATACAAGTCACCCGAGTATGCACAACTTGGGCGCATCACTAAGAAGACCGACGTCTGGAGTCTTGGGATTCTAATACTGGAGATCTTAACAGGCAAGTTCCCGGAGAACTATCTCAAACAAAGGCACGATAGTGCTTCTGACATTGCCTCTTGGGTCAACGCGATGATCACCGAGAAGCGCACCAGCGAAGTCTTTGATGTCGAGATGGGTGAACTCGCCGATAATAAAGCTGAATTGCTCAAACTATTGAAGATTGGCTTGAGTTGCTGTGAGGAGAATGTGGAAAGAAGGTTGGACATCAAGGAAGCTCTTGAACAGATTGAAGATTTGAAAGAAGTGCAAGATATTGGAGGATATAGTCATACCATAAATGTTACTCGTCATCATGCTCATGGTGATTCTTATTCCGCAGCCGTCTG 2144 0.4678 MLMGARSTAVGLVRAPAALTSNNDDDNKFVSKLVMFNVITNVKVVVVVFINVLLVLSSCAPDSRFNEADALLRLKGSLNNAVRLGSWDPSINPKPPCSGNRNNWEGVICVDDKVLGLRLESMGLHGKIDIDSLVALPFLRMLSLMNNTFTGSIPSINMLHHLRSIYLSYNHFSGEIPDDAFKGMHKLKKVYLSNNEFTGKIPSSLASLPNLMHLRLDANKFQGQIPTFSNATRLTVVDFSNNELEGFIPDNLRPFPATAFSGNAKLCGRPLDSSCSAAAVETPAKTTVLKIFLIVMLTAVLIAILVAAFITIFRLRSSNQRQQIVRLGSRHAAAMSSSATTLPNSSRGSSKKYAPPVYRQQQAAGVVDHHKVAVGARSSAYHHQQQAAAGKLSFVRDDDRQRFDVHDLLKASAEILGSATFGSSYKAVVLDGSQVVVVKRYKQMNNVGREEFQEHMRRLGALSHPNLLPLVAYYYRKEEKLLLTDFVDNGCLASHLHGNHNLDKPCLDWPTRLRIVKGVARGLAYLYSALPSVVVPHGHLKSSNVLLDESFNPLLTDYALIPLTNIDLAQQQMMPYKSPEYAQLGRITKKTDVWSLGILILEILTGKFPENYLKQRHDSASDIASWVNAMITEKRTSEVFDVEMGELADNKAELLKLLKIGLSCCEENVERRLDIKEALEQIEDLKEVQDIGGYSHTINVTRHHAHGDSYSAAV 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02671 714 Gene3D Phosphorylase Kinase; domain 1 374 486 - -
Bva02g02671 714 Pfam Protein kinase domain 414 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02671 714 Coils Coil 668 688 - -
Bva02g02671 714 Gene3D Transferase(Phosphotransferase) domain 1 487 696 - -
Bva02g02671 714 Pfam Leucine rich repeat 161 221 IPR001611 GO:0005515
Bva02g02671 714 SUPERFAMILY Protein kinase-like (PK-like) 414 684 IPR011009 -
Bva02g02671 714 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 41 696 - -
Bva02g02671 714 Pfam Leucine rich repeat N-terminal domain 67 109 IPR013210 -
Bva02g02671 714 SUPERFAMILY L domain-like 94 256 - -
Bva02g02671 714 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 41 696 - -
Bva02g02671 714 Gene3D Ribonuclease Inhibitor 161 277 IPR032675 -
Bva02g02671 714 ProSiteProfiles Protein kinase domain profile. 410 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02671 714 Gene3D Ribonuclease Inhibitor 61 160 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02671 Bva-Chr2 24595650 24598291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02671 45 687 Receptor kinase-like Gene Family AT5G35390 47.641 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva02g02671 Pkinase 8.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02671 - - aprc:113854862 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02671 02 24595650 24598291 Bva02g02671 02 24595650 24598291 ECH