Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02670 ATGTTGTCCGAGTTGCTCGGTATTCACACATATTCCGCTCTCCCAATTCCAGTCCCACGCAACAGTGATACCATTTTCTTGTGTATAAATATTCGTTGCAGTTACAGCTCCAGGACTAGGAGACCTAGGAATCCCCACTCCAGCTCCAACTCTTTCCGTCTTTACCGAGGACTTAGCTATTACTGTCGTCCCCTACGAATACAGGCTTCCCCCTTGGGCAATAGCAATAGCAATAGCAATTCGGAACCAGTTCTCAATAGCCAGTCGGAGTCCGAACTGAAGGATGCTCAGAATGCTGTTTCAacttttcttcatcaattgGGACTATCGGAGGAGGAATCCCAGTCTATCGCCTCAAATTCACCCAAATATTTGCGGATGTTAGTAGATGGGGTTCGGGACTTGGATGAGCTTTCAATGTGGAATTCCAATTCCTGGAAAGGTGAGGAGGAAAATGTTGATGGCTTCCAGTTCCAGGACAAGGTACTTCATATTGCTAGGGGGAAAAGTGATAACGGAAAAGTTGCCTTCTTGGAGAGTCTTGGCTTTAGTCTGTCTTCAGCTATGAATGTCGCCAGGTATCTATCGGCAGAGACGCTTACTGCTCTCGTTCATAAGGTTAAATGTATGAAGGAGCTGTTCTTTTCTGGCAGTGACAATGAGGACTTCCCGGTGAAAAATGTTCGCCGTATGATGATGCAGTTATCAATTCCTATTGATGAAGATCTACAACAGACATTATCATTCTTTGAAAAGGTTGAAGCAAAGCGTGGAGGTTTAAACATGTTACATTCCAAGGATgcttcttttcattatttgattGAATCATTTCCTCGCCTACTTTTGTTGTCAGTGAAATACCGCATCATACCTATAATGGAATTTCTTGAGAATATTGGAATCTCCAGAGGTCGCATCAGAAACGTAATATTGGTTTTTCCTCCCATGCTGCTATGGAATATTGACGTCTTTAAAACCAGAGTCCGAGCCTTGAAGGAGaTTGGTATCGTGGTTAAAGACTATGCCAAGGTGTTGCTGAAATATCCTTGGATTCTATCTACAAGTATTCAAGAGAATTACAAGGAGGTCCTTTCCTTGCTTGATTCAGAGAAGGTTCCAAAGGCATGTATAGACCGTGCGATCAAAAGCTGGCCTCATCTATTGGGTTCTTCAACTAGCAATCTAAGGTTGATGCTGGATCAGTTTTTTAGACTAGGTgtacaagaaaagaatttggaTCGGGTTGTTGTTAAAAGTCCTCAGCTACTATTAATGAAGCCCCAAGACTTTCTCCAGGTTATCGTGTTCCTTGAAAATATGGGTTTGGATAAAGAAAGTATAGGCAAAATACTTGCTCGCTGTCCTCACATTTTTGCTGCCAGTATTAGTAAAACTCTCCAGAGGAAGATTGAGTTCCTTAGAAAAGTCGGTATTTCTGAAGTTCCCCTTCCTCGAGTTATCAAAATGTATCCACAGCTTCTTGTGGCTGACACTAATAGAACTGTACTACCTCGGGTGATATATTTGATGAAGTTAGGGCTTTCGCAAAGAGAGATTGTCTTTATGGTACGCTCATTTCCTCCTCTCCTTGGATACAGCATTGAGGAGGTTCTGAGACCAAAAATAGAATTCCTGGTGAATGCAATGGAGAGGCCAGTAAGACACGTGGTAGGCTATCCTAGGTATTTTAGCCATTCATTAGAGAAGAAGATAAAGCCAAGATATTTGGTGCTGAAAGGAAGGAATATTAAATGGAGCTTAAAGGATATGCTCGGAAAAAATGACGAAGAATTTGCTGCCGACTTAATGGGTGTAGAAAATGTTATCATGTTCCTTGAAAATATGGGTTTGGATAAAGAAAGTATTGGCAAAATACTTGCTCGCTGTCCTGAAATTTTTGCTGCCAGTATTAGTGAAACTCTCCGAGGGAAGATTGAGTTCCTTAGAAAAGTCGGTATTTCTGAAGTTCACCTTCCTCGGGTTATCAAAATGTATCCACAGCTTCTTGTGGCTGACACTAATAGAACTGTACTACCTCGGGTGATATATTTGATGAAGTTAGGGCTTTCACAAAAAGAGATTGCCTTTATGGTATGCTGCTTTCCTCCTCTCCTTGGGTACAGCATTGAGGAGGTTCTGAGACCAAAAATAGAATTCCTGGTGAACACAATGGAGAGGCCAGTAAGACACGTGGTAGGCTATCCTAAGTATTTTAGCCATTCATTAGAGAAGAAGATAAAGCCAAGATATTTGGTACTGAAAGGAAGGAATATTAAATGGAGCTTAAAGGATATGCTCGGAAAAAATGACGAAGAATTTGCTGCTGACTTTATGGGTGTAGAGAATGTACTCGTGTG 2357 0.4077 MLSELLGIHTYSALPIPVPRNSDTIFLCINIRCSYSSRTRRPRNPHSSSNSFRLYRGLSYYCRPLRIQASPLGNSNSNSNSEPVLNSQSESELKDAQNAVSTFLHQLGLSEEESQSIASNSPKYLRMLVDGVRDLDELSMWNSNSWKGEEENVDGFQFQDKVLHIARGKSDNGKVAFLESLGFSLSSAMNVARYLSAETLTALVHKVKCMKELFFSGSDNEDFPVKNVRRMMMQLSIPIDEDLQQTLSFFEKVEAKRGGLNMLHSKDASFHYLIESFPRLLLLSVKYRIIPIMEFLENIGISRGRIRNVILVFPPMLLWNIDVFKTRVRALKEIGIVVKDYAKVLLKYPWILSTSIQENYKEVLSLLDSEKVPKACIDRAIKSWPHLLGSSTSNLRLMLDQFFRLGVQEKNLDRVVVKSPQLLLMKPQDFLQVIVFLENMGLDKESIGKILARCPHIFAASISKTLQRKIEFLRKVGISEVPLPRVIKMYPQLLVADTNRTVLPRVIYLMKLGLSQREIVFMVRSFPPLLGYSIEEVLRPKIEFLVNAMERPVRHVVGYPRYFSHSLEKKIKPRYLVLKGRNIKWSLKDMLGKNDEEFAADLMGVENVIMFLENMGLDKESIGKILARCPEIFAASISETLRGKIEFLRKVGISEVHLPRVIKMYPQLLVADTNRTVLPRVIYLMKLGLSQKEIAFMVCCFPPLLGYSIEEVLRPKIEFLVNTMERPVRHVVGYPKYFSHSLEKKIKPRYLVLKGRNIKWSLKDMLGKNDEEFAADFMGVENVLV 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02670 785 PANTHER CGI-12 PROTEIN-RELATED 231 319 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 231 319 - -
Bva02g02670 785 SMART mt_12 695 727 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 SMART mt_12 728 759 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 SMART mt_12 520 552 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 SMART mt_12 342 373 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 SMART mt_12 659 690 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 SMART mt_12 448 479 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 SMART mt_12 553 584 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 SMART mt_12 484 515 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 SMART mt_12 413 443 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 SMART mt_12 378 408 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 SMART mt_12 623 654 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 SMART mt_12 307 337 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 Gene3D Transcription termination factor 3, mitochondrial 605 783 IPR038538 -
Bva02g02670 785 Gene3D Transcription termination factor 3, mitochondrial 403 604 IPR038538 -
Bva02g02670 785 PANTHER CGI-12 PROTEIN-RELATED 608 779 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 PANTHER CGI-12 PROTEIN-RELATED 323 423 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 323 423 - -
Bva02g02670 785 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 608 779 - -
Bva02g02670 785 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 378 600 - -
Bva02g02670 785 Pfam mTERF 605 774 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 Pfam mTERF 97 327 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 Pfam mTERF 293 599 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 PANTHER CGI-12 PROTEIN-RELATED 378 600 IPR003690 GO:0003690|GO:0006355
Bva02g02670 785 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02670 Bva-Chr2 24585861 24593914 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva02g02670 mTERF 2.1e-84 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02670 K15032 - qsu:112006202 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02670 02 24585861 24593914 Bva02g02670 02 24585861 24593914 ECH