Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02638 ATGTCCACATTCATACGTCGTCCGCTAGCTAATGCAAAATCAATCCTATATATACGCCGTCGTCTGCTCTTTCTCTTCCGGTGCGAGAGCTCCAAGGGCAACAACATGAACTCCACTTCGCGGGGTTCAACATCTTCTTCCAATGGCCTACTCACGGTCACCGTCGCCAGAGAAAATGACAACTCTCAGGGTGTCCCTGCCACAACCATTGACAATGGTTCTTTCGATGACGTTGACGATGACATGTTGGAGGATCCTGATGATCCTTTTGACATTGCACACACCAAAAATGCACCTCATGAGACCCTCAGGCGTTGGAGACAAGCAGCACTAGTGCTCAATGCTTCCCGTCGATTTAGGTATACTTTGGacttgaaaaaagaagaggagaaagaggaaaagaaaagcttgaTCAGAGCCCATGCACAAGTCATAAGAGCAGCATTGCTTTTCAAATTGGCTGGAGAAGGGGAACTagTAATAAGTTCAGCAGTAGCACCCCCAACCCCAGTTGGTGACTTTACCGTCGGACTTGAACAACTTGTTTCAATGTCTAAGGATCAGAATCTTTCTGCGCTACAGCAATATGGAGGGGTTAAAGGCCTATCAAGTTTACTAAAGTCAAATTCCGAGAAAGGAATTAGTGGAAATGATGCTGATTTAGTAAAACGAAAAAATGCGTTTGGATCAAATACATATCCTCGGAAAAAGGGTAGAAGTTTCTTGAGGTTTCTATGGGAAGCTTGGCAAGATTTGACCCTTATCATATTGATTATAGCTGCTGCAGTGTCATTGGCACTTGGAATAAAAACAGAGGGTTTGGAAGAAGGATGGTATGATGGGGGAAGCATCGCATTTGCAGTTTTTCTTGTCATTGTAGTTACAGCTGTCAGTGATTATCGACAATCTCTACAGTTTCAGAATTTGaatgcagaaaaacaaaatatacaattgGAGGTTATCAGAGGTGGCAGAACAGTTATGATATCAATTTTTGATATTGTTGTTGGTGATGTTGTACCTCTTAAAATAGGAGATCAGATTCCTGCTGATGGAGTTTTAATCAATGGTCATTCACTTGCCATCGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCATAAGGATAATAAAACACCCTTTTTGATGTCTGGTTGCAAAGTAGCTGATGGAGTTGGTTCCATGCTGGTTACTGGTGTTGGTATCAATACTGAGTGGGGATTGTTGATGGCAAGTATATCAGAAGATACAGGAGAAGAGACACCTTTACAGGTACGTTTGAATGGAGTTGCGACTTTTATTGGCATAGTTGGGCTTTCGGTGGCTGTTTGTGTGCTTTTAGTCCTTTTGGGCAGATATTTTTCTGGCCATACAGAAGATGCAGATGGAAGTGTCCAGTTTGTTGCTGGCAAAACTAGTGTGAGCAACGCAGTAGACAGTgtcatcaaaatttttacaattgCAGTCACTATTGTGGTTGTTGCAGTGCCTGAAGGTCTTCCTTTGGCTGTGACATTAACTCTGGCATACTCAATGCGGAAAATGATGGCAGACAAAGCCTTgGTACGAAGGCTGTCCGCCTGTGAAACTATGGGTTCAGCAACAACGATTTGTAGTGATAAGACGGGAACATTGACCTTAAATGAGATGACTGTGGTTGAGGCATATGTTgggaggaagaaaataaatccacCAGACGACTCTTCACAATTGCACCAGGAAGTTCTATCCCTGATAAATGAGGGCATTGCACAGAATACTACTGGAAATGTTTTTGTGCCCAAGGATGGTGGAGAGGCGGAGGTTTCAGGATCTCCCACAGAAAAGGCAATCCTTTTTTGGGGTGTCAAGCTGGGAATGAATTTCGAGTTTACCAGATCAAAGTCGAAAATTCTCCATGTCTTCCCCTTCAATTCCGAGAAAAAGCGAGGTGGTGTTGCACTGAAGCTGGCGGACTCTGGAGTACGCATTCATTGGAAAGGAGCTGCCGAGATAGTTCTAGGCGCATGTACACACTATGTTGATTCAAATGGTTCTCTACAATCTATCGAAGAAGATAAGgaatttttcaaaacagCTATTGATGATATGGCTGCTAGCAGCCTGCGATGTGTTGCCATTGCATACAGATCCTGTGAATTGGATAAAGTTCCCTCCAACGAGGATGATTTGGTCCAGTGGTCCTTACCTGAAAAAGAGCTTGTTTTGCTTGCTATTGTTGGTATTAAGGATCCATGTCGCCCTGGTGTCAAAGATGCAGTGAAAATATGCACAGAAGCTGGTGTTAAGGTACGCATGATTACTGGAGACAATATTCAAACGGCAAAGGCAATAGCTTTGGAGTGTGGGATACTTACTTCAATAGAAGACGCTGTGGAGCCAAACATAATTGAAGGAAAAACATTCCGTGCCTtatctgaaaaagaaagggagcAAATTGCTAAGAAAATAACTGTGATGGGAAGATCTTCTCCTAATGATAAGCTTTTGCTTGTACAAGCATTACGTAAGGGAGGTGACGTAGTTGCTGTCACTGGAGATGGCACCAATGATGCTCCGGCGCTTCATGAGgcagatattggtctttctatggGCATTCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATTATACTGGATGATAACTTTGCATCTGTAGTAAAGGTTGTTCGCTGGGGCCGTTCTGTATATGCAAATATTCAGAAGTTTATCCAGTTCCAGCTCACTGTCAATGTTGCAGCTCTTGTAATAAATGTTGTGGCATCGGTATCCTCTGGGGATGTTCCTTTAAATGCAGTACAgCTTTTATGGGTCAACCTTATCATGGACACACTTGGGGCCCTCGCTCTGGCTACTGAACCTCCAACAGACAGCCTTATGCGCAGATCACCAGTTGGCCGGAGGGAACCTCTTATAACAAATATCATGTGGAGGAACTTGATCATACAGGCTTTATATCAAGTTACTCTTCTCCTTGTTCTTAATTTCGGTGGGAGCAGTATTTTGCATTCTTATGGATCTAAGGAACATGTCTATGAAGTAAAGAACACTTTGATATTCAATGCATTCGTGTTCTGCCAAATATTCAATGAGTTCAATGCTCGGAAACCAGAAGAATTGAATGTGTTTCGGGGAGTGACTAAGAACTACCTCTTCATGGGGATTGTTGGAATGACCTTCATTCTTCAGATACTCATCATCGAGTTCCTGGGAAAGTTCACCACGACAGTGAGGCTTGATTGGAAGCTGTGGCTAGTTTCTATTATCATCGGGATTATCAGTTGGCCACTTGCTATAATTGGAAAATTAATTCCAGTACCCAAAACACCCTTGTCCAAGTACTTCGTCAAGATGTTGAAGCCATTTAAGCGATGCAGGAGGCCCCGCGCTGCATA 3404 0.411 MSTFIRRPLANAKSILYIRRRLLFLFRCESSKGNNMNSTSRGSTSSSNGLLTVTVARENDNSQGVPATTIDNGSFDDVDDDMLEDPDDPFDIAHTKNAPHETLRRWRQAALVLNASRRFRYTLDLKKEEEKEEKKSLIRAHAQVIRAALLFKLAGEGELVISSAVAPPTPVGDFTVGLEQLVSMSKDQNLSALQQYGGVKGLSSLLKSNSEKGISGNDADLVKRKNAFGSNTYPRKKGRSFLRFLWEAWQDLTLIILIIAAAVSLALGIKTEGLEEGWYDGGSIAFAVFLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVIRGGRTVMISIFDIVVGDVVPLKIGDQIPADGVLINGHSLAIDESSMTGESKIVHKDNKTPFLMSGCKVADGVGSMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVCVLLVLLGRYFSGHTEDADGSVQFVAGKTSVSNAVDSVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVEAYVGRKKINPPDDSSQLHQEVLSLINEGIAQNTTGNVFVPKDGGEAEVSGSPTEKAILFWGVKLGMNFEFTRSKSKILHVFPFNSEKKRGGVALKLADSGVRIHWKGAAEIVLGACTHYVDSNGSLQSIEEDKEFFKTAIDDMAASSLRCVAIAYRSCELDKVPSNEDDLVQWSLPEKELVLLAIVGIKDPCRPGVKDAVKICTEAGVKVRMITGDNIQTAKAIALECGILTSIEDAVEPNIIEGKTFRALSEKEREQIAKKITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVASVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDSLMRRSPVGRREPLITNIMWRNLIIQALYQVTLLLVLNFGGSSILHSYGSKEHVYEVKNTLIFNAFVFCQIFNEFNARKPEELNVFRGVTKNYLFMGIVGMTFILQILIIEFLGKFTTTVRLDWKLWLVSIIIGIISWPLAIIGKLIPVPKTPLSKYFVKMLKPFKRCRRPRAA 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02638 1134 SUPERFAMILY Calcium ATPase, transmembrane domain M 196 1109 IPR023298 -
Bva02g02638 1134 PRINTS P-type cation-transporting ATPase superfamily signature 363 377 - -
Bva02g02638 1134 PRINTS P-type cation-transporting ATPase superfamily signature 846 865 - -
Bva02g02638 1134 PRINTS P-type cation-transporting ATPase superfamily signature 870 882 - -
Bva02g02638 1134 PRINTS P-type cation-transporting ATPase superfamily signature 539 553 - -
Bva02g02638 1134 PRINTS P-type cation-transporting ATPase superfamily signature 739 750 - -
Bva02g02638 1134 PRINTS P-type cation-transporting ATPase superfamily signature 761 771 - -
Bva02g02638 1134 PRINTS Sodium/potassium-transporting ATPase signature 658 676 - -
Bva02g02638 1134 PRINTS Sodium/potassium-transporting ATPase signature 532 553 - -
Bva02g02638 1134 PRINTS Sodium/potassium-transporting ATPase signature 282 302 - -
Bva02g02638 1134 ProSitePatterns E1-E2 ATPases phosphorylation site. 541 547 IPR018303 -
Bva02g02638 1134 PANTHER CALCIUM-TRANSPORTING ATPASE 85 1124 - -
Bva02g02638 1134 SUPERFAMILY Calcium ATPase, transduction domain A 317 412 IPR008250 -
Bva02g02638 1134 Pfam haloacid dehalogenase-like hydrolase 536 860 - -
Bva02g02638 1134 SMART Cation_ATPase_N_a_2 195 269 IPR004014 -
Bva02g02638 1134 Pfam Cation transporter/ATPase, N-terminus 197 264 IPR004014 -
Bva02g02638 1134 Gene3D - 247 1098 - -
Bva02g02638 1134 Pfam E1-E2 ATPase 316 517 - -
Bva02g02638 1134 Gene3D - 549 746 IPR023299 GO:0000166
Bva02g02638 1134 Gene3D - 536 891 IPR023214 -
Bva02g02638 1134 Pfam Cation transporting ATPase, C-terminus 931 1107 IPR006068 -
Bva02g02638 1134 Pfam Ca2+-ATPase N terminal autoinhibitory domain 87 130 IPR024750 GO:0005516
Bva02g02638 1134 Gene3D - 100 153 - -
Bva02g02638 1134 Gene3D - 220 415 - -
Bva02g02638 1134 SFLD Haloacid Dehalogenase 521 898 - -
Bva02g02638 1134 CDD P-type_ATPase_Ca_PMCA-like 223 979 - -
Bva02g02638 1134 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 812 926 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g02638 1134 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 474 570 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g02638 1134 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 186 1109 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bva02g02638 1134 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 545 751 IPR023299 GO:0000166
Bva02g02638 1134 SFLD p-type atpase 521 898 IPR044492 -
Bva02g02638 1134 PANTHER CATION TRANSPORTING ATPASE 85 1124 - -
Bva02g02638 1134 SUPERFAMILY HAD-like 537 951 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02638 Bva-Chr2 24421906 24435518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02638 43 1134 Primary Pumps ATPases AT3G21180 75.572 0.0 1664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02638 K01537 - gmx:100817367 1743.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02638 02 24421906 24435518 Bva02g02638 02 24421906 24435518 ECH