Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02630 ATGTTGGATCTTTCACACAATGCATTCAGTGGAGGTATTCCATCAGGCTTAGGGAACTGTAGCAATCTAGAACAATTTGCAGCTGTACAGAGCAACTTATCGGGTAGTATCCCATCTTCCTTAGGCCTACTACGTAATCTTTCTATTCTTAGGCTTCCTGAGAATCTTTTGTCGGTAAAGATACCCCCAGAAATTGGCAACTGCAAGTCTTTGAAAGAGTTACATTTGTATTCCAACAGGCTTGAGGGAGAGATTCCCAGGGAATTGGGAAAGCTGAGTGAATTACAGGACCTTGAGTTATTTTCCAACTATTTGGTCGGTGAAATTCCACTAAGCATTTGGAAGATTCAGAGTCTCAAGCAGATACTTGTGTATAACAATAACCTTTCTGGAGAACTACCTGTAGAGATGACAGAACTCAAGCATCTAAAGAATATCACTTTGTATAACAACAGGTTCTCTGGAGTCATACCTCAGAGCTTGGGAATTAATAGCAGTCTAGAGATATTGGATTTTACAAACAATACGTTTACTGGCAACCTTCCACCAAATCTTTGttttggaaagaaattaaGGATACTGAATATGGGTTTCAATCAATTCCAAGGGAGCATACCTTCTGATGTAGGAAGATGCACAACTCTTACAAGGTTGATTCTCAAAGAAAACAACTTCACAGGGCCCCTTCctgattttgaaagaaatccaaatcttttatttgttaacaTCAGCAATAACAATATTAGTGGAACGCTTCCCTCAAGTTTAGGAAACTTGACAAATGCGACTACTATAATTTTGTCCATGAACAAATTTTCAGGGCTTATACCCCCAGAGCTAGGAAGCCTTGTGAACATTAGGACTTTGATTCTTGCTCACAACAACTTGGAAGGTCCTCTGCCGCCTCAGCTGTCAAATTGTAGCAGAATGGATAGTTTTGATGTGGGATTCAATTTCCTAAATGGTTCACTTCCTTCAAGTTTGGGGAGATGGATAGGGCTaactactttaattttaagagagAATCACTTTACTGGGGGCATCCCGGCTTTCCTGTCAGAGTTTAAAAAGCTTTCCGAGCTTCAACTGGGTGGAAACATGTTTGGAGGTGAAATTCCAAAATCAATTGGAGCGTTGCAGTATCTGCAATATGGGTTGAATCTAAGCGCTATTGGGTTGACAGGTGAGATTCCATCGGTGATTGGGAATCTGGAAAAGCTGGAAAGACTTGATCTATCTCACAACAATTTGACAGGAAGTATAGAAGTTCTTGATAAACTCTCTTCATTAGGTGAAGCCAATATTTCATACAATTCCTTTGTTGGTCCTGTACCGGTGTCGCTGATGAAGAAGTTAAATTCTTCATCGTTTTTGGGTAATCCTGGCCTATGTTTTAGTTGTTCATCACCGGGTGGTTTGAGTTGCATGAAAGACAACTATTTAAAATCATGTGACTTCAAACCAACCAATCATAAAGGGCTCAGAAGGGTTCAAATTGTGCTGATAGCGCTTGGATCCTCAATATTTGCTGTTTTTCTGCTGCTGGCAGTGGTTGTTGTGGTTGTCCGTGGGAGAAGATCTAAGCAGGAAGTTGAGATCCCTGGTAAAGAGGGTTCTTCTTCCCTTCTGAGCAAAGTGATGGAGGCTACATCGAACTTAAATGAGCGGTATATTATTGGTCGAGGAGCCCATGGAGTTGTATATAAAGCAGCTCTAGGTGCAGACAGAGTTTATGCCGCTAAGAAGTTTGTATTTGCTGGGAACAGAGGAAATAGCTCAAGCATGGTGAGAGAAATTCAAACGATTGGAAAGATTAGACATAGAAATCTGGTGAAATTGGAGGACTTTTGGCTGAGAAAGGACTACGGTCTAATCTTGTACAGCTACATGCCAAATGGGAGCCTTGAATATGTATTGCATGAAAAGAATCCAGCACCAACCTTAGAGTGGAGTGTCCGGTTTAAGATAACTGTTGGAATTGCACATGCACTTGCATATCTCCATCATGACTGTGATCCTCCCATAGCGCACCGAGACGTCAAACCAAAGAATATACTTCTTGATTCCGATATGGAGCCTCACATTTCTGATTTTGGCATTGCGAAGCTTTTGGATCACTCTTGTACTTCAACGATGTCAACAGCTGTTCCTGGCACAATCGGGTATATTGCACCagAGAATGCATATACAACAGCAAAAAGCAAGGAATCTGATGTATACAGTTATGGGGTAGTTGTGCTTGAAATAATAAGCAGGAAGAAGGCAGTTGATCCATCATTTGTGGAGGGAACAGATATAGTGGGGTGGGTTAGAGCTGTGTGGGATGAAACAGGAGAAATCAATAGAATTGTTGATTCAGGGCTTGCCGAGGAACTTTTGGATTCAAATCTGATGGAACAAGCTGAGAAAGTGCTTTTGGTGGCTTTAAGATGCACAGACAAGGATCCCCACATTAGACCCACGATGAGAGATGTCGTCAAACAGTTATTAGATGCTGATTCCGGGGCCACAAGTAGAAAGAGTTATGGCTA 2531 0.4054 MLDLSHNAFSGGIPSGLGNCSNLEQFAAVQSNLSGSIPSSLGLLRNLSILRLPENLLSVKIPPEIGNCKSLKELHLYSNRLEGEIPRELGKLSELQDLELFSNYLVGEIPLSIWKIQSLKQILVYNNNLSGELPVEMTELKHLKNITLYNNRFSGVIPQSLGINSSLEILDFTNNTFTGNLPPNLCFGKKLRILNMGFNQFQGSIPSDVGRCTTLTRLILKENNFTGPLPDFERNPNLLFVNISNNNISGTLPSSLGNLTNATTIILSMNKFSGLIPPELGSLVNIRTLILAHNNLEGPLPPQLSNCSRMDSFDVGFNFLNGSLPSSLGRWIGLTTLILRENHFTGGIPAFLSEFKKLSELQLGGNMFGGEIPKSIGALQYLQYGLNLSAIGLTGEIPSVIGNLEKLERLDLSHNNLTGSIEVLDKLSSLGEANISYNSFVGPVPVSLMKKLNSSSFLGNPGLCFSCSSPGGLSCMKDNYLKSCDFKPTNHKGLRRVQIVLIALGSSIFAVFLLLAVVVVVVRGRRSKQEVEIPGKEGSSSLLSKVMEATSNLNERYIIGRGAHGVVYKAALGADRVYAAKKFVFAGNRGNSSSMVREIQTIGKIRHRNLVKLEDFWLRKDYGLILYSYMPNGSLEYVLHEKNPAPTLEWSVRFKITVGIAHALAYLHHDCDPPIAHRDVKPKNILLDSDMEPHISDFGIAKLLDHSCTSTMSTAVPGTIGYIAPENAYTTAKSKESDVYSYGVVVLEIISRKKAVDPSFVEGTDIVGWVRAVWDETGEINRIVDSGLAEELLDSNLMEQAEKVLLVALRCTDKDPHIRPTMRDVVKQLLDADSGATSRKSYG 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02630 843 ProSiteProfiles Leucine-rich repeat profile. 406 428 IPR001611 GO:0005515
Bva02g02630 843 Gene3D Phosphorylase Kinase; domain 1 518 629 - -
Bva02g02630 843 Gene3D Ribonuclease Inhibitor 1 233 IPR032675 -
Bva02g02630 843 SUPERFAMILY L domain-like 190 447 - -
Bva02g02630 843 SUPERFAMILY L domain-like 2 245 - -
Bva02g02630 843 Pfam Protein kinase domain 557 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02630 843 Gene3D Transferase(Phosphotransferase) domain 1 630 841 - -
Bva02g02630 843 ProSiteProfiles Protein kinase domain profile. 553 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02630 843 SMART serkin_6 553 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02630 843 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 828 - -
Bva02g02630 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 675 687 IPR008271 GO:0004672|GO:0006468
Bva02g02630 843 SUPERFAMILY Protein kinase-like (PK-like) 540 829 IPR011009 -
Bva02g02630 843 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 2 828 - -
Bva02g02630 843 ProSitePatterns Protein kinases ATP-binding region signature. 559 582 IPR017441 GO:0005524
Bva02g02630 843 Gene3D Ribonuclease Inhibitor 234 470 IPR032675 -
Bva02g02630 843 Pfam Leucine Rich repeat 406 419 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02630 Bva-Chr2 24382533 24386315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02630 2 841 Receptor kinase-like Gene Family AT1G73080 55.269 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva02g02630 Pkinase 7.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02630 - - gmx:100778035 1160.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02630 02 24382533 24386315 Bva02g02630 02 24382533 24386315 ECH