Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02622 ATGAGACCGATTCCACCACCACCTGGAGCAGGAAATGGCACCGGAACTGGGACCGGAACAATCAATCGTGACCGTCCACGAGGAGGTCGTCGCAGAGACTTGACCTTGCCGTTGCCTCGACGCGAGGCACCGTTAGCGGTACCTCTTCCTCTGCCCCCTAACTCAGCACCGTCAACGAGTCACCACTCCGGCCCGAGTCATCTGCTGATCCCTTTCTCGGAGCTGGAAAGACAAAATCGTATCGGTAGCGGAGCTGGTGGCACCGTCTACAAGGTCGTCCACCGACCCACTGGTCGTGTTTACGCCTTAAAGGTTATCTACGGTCACCATGAAGACTCCGTTCGCATTCAGATCCGCCGTGAAATCCAGATCCTTAGGGACGTGGATGACGCGAACGTTGTAAAGTGCCATGACATGTACGATCACAACGGCGAAATCCAAGTCCTTCTTGAGTTCATGGATGGTGGTTCCTTAGAAGGGAAACATATCCCCCATGAGCAACAGCTCGCCGATCTAGCCCGTCAGATTCTCCGTGGCCTGGCTTACCTTCATCGCCGCCATATCGTTCACCGGGATATCAAGCCGTCCAACTTGTTAATTAACTCTCGGAAGGAGGTGAAGATAGCTGATTTCGGTGTGGGTCGGATTCTGGCCCAAACCATGGATCCGTGTAATTCATCGGTGGGCACGATTGCTTATATGAGCCCAGAGAGAATCAACACGGACATCAACGATGGGCAATACAATGCTTACGCAGGTGATATATGGAGCCTTGGGGTCAGCATACTGGAATTCTATATGGGTAGATTTCCATTTGCCGTGGGAAGGCAAGGGGATTGGGCAAGCTTGATGTGTGCGATATGTATGTCGCAGCCGCCAGAGGCGCCGGCGACGGCTTCCAGGGAGTTTAGAGATTTTATATCGCGGTGTTTGCAGAGAGATCCCTCGCGGAGGTGGACGGCGTTGCAATTGTTGGGGCACCCTTTTGTATCTCAGGGACCTGGCCACCAGAACCACgttcatcaaaatcttcatcAACTACTACCTCCACCTCGACCACTTCCTTCATA 1070 0.5262 MRPIPPPPGAGNGTGTGTGTINRDRPRGGRRRDLTLPLPRREAPLAVPLPLPPNSAPSTSHHSGPSHLLIPFSELERQNRIGSGAGGTVYKVVHRPTGRVYALKVIYGHHEDSVRIQIRREIQILRDVDDANVVKCHDMYDHNGEIQVLLEFMDGGSLEGKHIPHEQQLADLARQILRGLAYLHRRHIVHRDIKPSNLLINSRKEVKIADFGVGRILAQTMDPCNSSVGTIAYMSPERINTDINDGQYNAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPATASREFRDFISRCLQRDPSRRWTALQLLGHPFVSQGPGHQNHVHQNLHQLLPPPRPLPS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02622 356 MobiDBLite consensus disorder prediction 1 67 - -
Bva02g02622 356 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 26 352 - -
Bva02g02622 356 CDD PKc_MAPKK_plant_like 73 330 - -
Bva02g02622 356 MobiDBLite consensus disorder prediction 24 38 - -
Bva02g02622 356 Gene3D Transferase(Phosphotransferase) domain 1 157 346 - -
Bva02g02622 356 Pfam Protein kinase domain 76 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02622 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Bva02g02622 356 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 26 352 - -
Bva02g02622 356 ProSiteProfiles Protein kinase domain profile. 75 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02622 356 Gene3D Phosphorylase Kinase; domain 1 60 154 - -
Bva02g02622 356 SMART serkin_6 75 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02622 356 SUPERFAMILY Protein kinase-like (PK-like) 73 349 IPR011009 -
Bva02g02622 356 ProSitePatterns Protein kinases ATP-binding region signature. 81 104 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02622 Bva-Chr2 24359438 24361259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02622 1 346 MAP Kinase Kinase Gene Family AT1G51660 68.611 5.40e-169 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Bva02g02622 Pkinase 1.7e-64 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02622 02 24359438 24361259 Bva02g02622 02 24359438 24361259 ECH