Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02621 ATGTTTACCAGGAAAGTAAAGTCTGTCTTGTTAATGTCTACTATAAGCTGGATCCACCCTCAACATCTTCCTCTTCAAATCAACTTTCCTAAGCAGATGGGTTCTGTAGAGGAGAAGATAGACCTTGATTTTGATGAGGAGATCCCTTTTAGCTCTTCACCATCTGCAAGGAAAGTCCATAATTTTGATTTCGAGACAACACACGTGCTTCCTCCTGTAAATTTGGTCGACTCACCCCTTTTTAAGCAAATTCGGATAAGACCCATTAGGAGCATATACATTGTCTTAATTAGGGCGAAGATCAACATATTGCTACCTTTTGGTCCCTTGGCCATATTGCTGCATTATGTAACGGGAAATCATGGATGGGTGTTTTTCTTCAGCCTATTGGGTATTACTCCTTTGGCAGAACGTCTGGGCTATGCTACCGAGCAGCTTGCATTGTACACTGGACCAACAGTTGGGGGTCTTCTGAATGCCACATTTGGCAATGCAACTGAAATGATTATATCCATTTATGCATTGAAAAATGGTATGATTAGGGTCGTTCAACAATCTTTACTGGGATCAATCTTGTCAAATATGCTTCTAGTTCTTGGATGTGCCTTCTTCACTGGTGGGATTGTCCACTACAAAAAGGTTCAGGTTTTCAATAAGGCAGCTGCTGTGGTCAATTCAGGATTGCTGTTAATGGCTGTAATGGGGATACTGTTTCCAGCTGTGCTTCACTTCACTCGCTCAGAAGTTCATTTTGGGAAATCAGAGTTAGCTCTATCTAGATTTAGTAGCTGTATAATGTTAATTGCATATGCGAGCTACCTTTTCTTTCAGCTAAGATTTCAACATAATCTTTATAGTCCTATTGAAGAGGATGGAGATAACAATGAAAATCCTGACGAggaggaagaaattgaattaaCTCAATGGGAAGCAATAAGCTGGCTTGCTGTTTTGACTGCCTGGGTATCTATATTGTCTGGATACCTTGTGGATGCCATCCAGGGTGCATCTGATTCAATGAATATGCCAGTGGCTTTTATTAGTGTTATTTTGCTTCCTATAGTGGGCAATGCTGCAGAGCACGCAAGTGCTATCATGTTTGCCATGAAGGACAAGCTTGATATCACACTTGGAGTTGCCATTGGATCATCTACGCAGATATCTATGTTTCTGATTCCCTTCTGCGTGGTTGTTGGTTGGTGCATGGGAATAGAAATGGACTTGAATTTTCAACTATTTGAGACAGCCACACTTTTTATCACTGTTCTGGTAGTTGCATTTATGTTGCAGGAAGGGACCTCGAATTATTTTAAGGGCTTGATGCTCATTCTATGCTATCTTATTGTTGCGGCCAGTTTTTTCGTACATGTAGATCCTTCCAATGGTGATAACTG 1394 0.4039 MFTRKVKSVLLMSTISWIHPQHLPLQINFPKQMGSVEEKIDLDFDEEIPFSSSPSARKVHNFDFETTHVLPPVNLVDSPLFKQIRIRPIRSIYIVLIRAKINILLPFGPLAILLHYVTGNHGWVFFFSLLGITPLAERLGYATEQLALYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYKKVQVFNKAAAVVNSGLLLMAVMGILFPAVLHFTRSEVHFGKSELALSRFSSCIMLIAYASYLFFQLRFQHNLYSPIEEDGDNNENPDEEEEIELTQWEAISWLAVLTAWVSILSGYLVDAIQGASDSMNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFLIPFCVVVGWCMGIEMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPSNGDN 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02621 464 TIGRFAM cax: calcium/proton exchanger 104 454 IPR004798 GO:0006816|GO:0015369
Bva02g02621 464 TIGRFAM caca2: calcium/proton exchanger 95 454 - -
Bva02g02621 464 Pfam Sodium/calcium exchanger protein 123 278 IPR004837 GO:0016021|GO:0055085
Bva02g02621 464 Pfam Sodium/calcium exchanger protein 314 451 IPR004837 GO:0016021|GO:0055085
Bva02g02621 464 Gene3D - 300 455 IPR044880 -
Bva02g02621 464 Gene3D - 152 290 IPR044880 -
Bva02g02621 464 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 33 462 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bva02g02621 464 PANTHER VACUOLAR CATION/PROTON EXCHANGER 33 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02621 Bva-Chr2 24352246 24359742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02621 89 459 Antiporters AT3G13320 77.419 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02621 K07300 - mnt:21384959 711.064