Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02620 ATGGGTAGTGAGACTGAGACTGTGACGAAGCGACAAAAGGAATTCATCTTCCGGTCTAAACTGGATGATATTTACATCCCCAAACACCTTCCCCTGCATTCCTATGTGTTCGAAAACCTTTCTGAATTTGGGTCACGTCCCTGTTTGATCAATGCCGTCACAGGGGATACCTACTCTTGCGACCAAGTCGAACTCACCGCCCGAAGAGTCGCCTCTGGCCTCAACAAATTGGGCATCAAACAAGGCGAAGTCATCATGCTTGTGCTCCCCAATTCCCCAGAATTCGTCTTCTCCTTTCTCGGTGCTTCTTATCGCGGTGCCGTCACCACTTCTGCCAACCCATTCTTCACTCCAGTTGAGATTGCAAAGCAAGCGAAAGCTTCCAAAGCGAAGCTCCTCATCACCCAAGCTTGTTATTATGACAAAGTAAAAGACTTGGATGTTAAACTCATGTTTGTGGATTCTCCTCCAGATGGCCATTTGCATTTCTCAGAGTTAAGTGAAGCTAATGAGGAAGAGATGGAAGAGGTGCAAATTAAACCAGATGATGTGGTGGCATTGCCCTATTCGTCGGGGACAACTGGTTTACCAAAAGGAGTGATGTTAACACATAAAGGGTTGGTGACTAGCATAGCACAGCAGGTGGATGGGGACAATCCTAACCTATATTACCATTCCGAGGATGTTATTCTATGTGTGCTTCCCCTGTTTCATATCTACTCCCTAAACTCTGTTTTCCTATGTGGGTTAAGAGCCAAAGCTGCAATATTATTGATGCCAAAGTTTGAGATAAATGCATTGTTGGGTCTGATACAAAAATACAAAGTGACAATTGCCCCAGTTGTGCCACCAATTGTATTGGCTATTTCCAAGTCACCAGATCTTGACAAGTATGATCTCTCTTCCATCAGGGTCTGGAAGTCCGGAGGAGCTCCTCTTGGCAAGGAAGTCGAAGACAGCCTCAAGGCCAAGTTCCCAAATGCCAAATTTGGTCAGGGATATGGGATGACAGAAGCAGGCCCCGTGCTGACAATGAGCTTGGCATTTGCGAAAGAGCCCACGGAGGTTAAAGCAGGGGCATGTGGCAGCGTGGTAAGGAACGCAGAGATGAAGATTGTGGACCCCGAAACAGGGCACTCTTTGCCCGCAAACCAACCCGGTGAGATCTGCATTCGCGGAGACCAAATCATGAAAGGGTATCTGAATGACCCAGAGGCTACGGAGAGAACCATAGACAAAGAGGGGTGGTTGCATACGGGAGACATTGGTTACATAGACGACGACAATGAGCTGTACATCGTTGATAGGCTGAAAGAGCTCATCAAGTACAAAGGATTCCAGGTTGCTCCGGCCGAACTGGAAGCACTTCTCCTCTCTCATCCTAAAATCTCTGATGCTGCTGTGGTCCCAATGAAGGATGAGGCAGCTGGAGAGGTGCCCGTTGCATTTGTGGTCAGATCCAATGGGAACGTCGACGCCCCAACAGAGGATGACGTTAAACACTTCGTCTCAAAACAgGTCGTCTTCTATAAAAGGATAAACCGAGTATTTTTCATTGATGCCATTCCCAAGTCACCATCAGGCAAAATTTTACGCAAGGATTTAAGAGCAAAGCTAGCAGCTGGTGTTCCACCAAATTG 1640 0.4713 MGSETETVTKRQKEFIFRSKLDDIYIPKHLPLHSYVFENLSEFGSRPCLINAVTGDTYSCDQVELTARRVASGLNKLGIKQGEVIMLVLPNSPEFVFSFLGASYRGAVTTSANPFFTPVEIAKQAKASKAKLLITQACYYDKVKDLDVKLMFVDSPPDGHLHFSELSEANEEEMEEVQIKPDDVVALPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGDNPNLYYHSEDVILCVLPLFHIYSLNSVFLCGLRAKAAILLMPKFEINALLGLIQKYKVTIAPVVPPIVLAISKSPDLDKYDLSSIRVWKSGGAPLGKEVEDSLKAKFPNAKFGQGYGMTEAGPVLTMSLAFAKEPTEVKAGACGSVVRNAEMKIVDPETGHSLPANQPGEICIRGDQIMKGYLNDPEATERTIDKEGWLHTGDIGYIDDDNELYIVDRLKELIKYKGFQVAPAELEALLLSHPKISDAAVVPMKDEAAGEVPVAFVVRSNGNVDAPTEDDVKHFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAGVPPN 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02620 546 Gene3D - 438 541 IPR045851 -
Bva02g02620 546 Gene3D - 9 437 IPR042099 -
Bva02g02620 546 Pfam AMP-binding enzyme 39 443 IPR000873 -
Bva02g02620 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 540 - -
Bva02g02620 546 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 10 540 - -
Bva02g02620 546 CDD 4CL 26 535 - -
Bva02g02620 546 Pfam AMP-binding enzyme C-terminal domain 452 529 IPR025110 -
Bva02g02620 546 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Bva02g02620 546 SUPERFAMILY Acetyl-CoA synthetase-like 15 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02620 Bva-Chr2 24349394 24351877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02620 9 507 Monolignol Biosynthesis Gene Families AT1G51680 69.472 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02620 K01904 - gmx:100819192 860.136