Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02607 ATGTCGAAAATATCACAGAAAAGCCTCAAAGTCACTGCAAATGCAAATAGTCCCAAGAAACTAGCCAAACGGACCCGAAAAACCATGCCAAGGGACTCTCCTCCACAAAGAAGCTCCATCTACAGAGGTGTCACCAGGCATCGATGGACAGGTCGATATGAGGCTCATCTGTGGGATAAGAATTGCTGGAATCAATCGCAGAACAAAAAAGGAAGACAAGTATATCTAGGGGcatatgatgatgaagaagcgGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTATTGGGGCCAAGACACTATCCTCAATTTCCCATTAGCAAATTATGAACAAGAGCTCAAAGAGATGGAGGATCTGTCCAAAGAAGAATATATTGGATCCTTAAGAAGAAAAAGCAGCGGCTTCTCTCGTGGAGTTTCCAAATATAGAGGCGTAGCAAGGCACCATCACAATGGAAGATGGGAAGCTCGTATTGGTAGAGTATTTGGCAACAAATATCTGTACCTTGGAACTTATGCTACACAAGAAGAAGCAGCCAGAGCATATGATATGGCAGCCATAGAGTACCGTGGACTTAACGCCGTTACAAACTTTGATCTCAGCCTTTACATCAAGTGGCTGCGTCCTAAAACCCAAACCCAAACCCAAGAAAACAACACTACTAATTGCAACCCTGAAAAAGGTCCTAATCCTGAACGCTTTGTCTCCCACCAGCTCAGCTCAACCACCGCTGAAACGTCACTGCGTCCACCACGACCCGGCGGAGCTGGTGGCGGTGGCTCCACATCATCTGCGCTAGAGCTTCTCCTACAGTCATCAAAGTTCAAAGACATGCTGGAGAGGAATTCGTCAGAGGTTGCTGTTGCTGATTACCCTACAACACCTCCGGAATCAAACCCTCCTCGTCGGACTTTCCCTGAAGATATTCAAACATTCTTTGCTTCTCAAGAATCAGACAGCTATACAGAGGGCGACGACATTATATTTGGTGATTTGAGCTCCATTGCTGCACCAATTTTTCATTGTGAGCTTGATGCTTA 1043 0.4506 MSKISQKSLKVTANANSPKKLAKRTRKTMPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNQSQNKKGRQVYLGAYDDEEAAARAYDLAALKYWGQDTILNFPLANYEQELKEMEDLSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAARAYDMAAIEYRGLNAVTNFDLSLYIKWLRPKTQTQTQENNTTNCNPEKGPNPERFVSHQLSSTTAETSLRPPRPGGAGGGGSTSSALELLLQSSKFKDMLERNSSEVAVADYPTTPPESNPPRRTFPEDIQTFFASQESDSYTEGDDIIFGDLSSIAAPIFHCELDA 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02607 347 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR-RELATED 13 334 - -
Bva02g02607 347 MobiDBLite consensus disorder prediction 287 306 - -
Bva02g02607 347 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 334 - -
Bva02g02607 347 MobiDBLite consensus disorder prediction 235 249 - -
Bva02g02607 347 CDD AP2 141 202 IPR001471 GO:0003700|GO:0006355
Bva02g02607 347 SMART rav1_2 142 206 IPR001471 GO:0003700|GO:0006355
Bva02g02607 347 SMART rav1_2 40 112 IPR001471 GO:0003700|GO:0006355
Bva02g02607 347 MobiDBLite consensus disorder prediction 1 19 - -
Bva02g02607 347 MobiDBLite consensus disorder prediction 213 228 - -
Bva02g02607 347 ProSiteProfiles AP2/ERF domain profile. 142 200 IPR001471 GO:0003700|GO:0006355
Bva02g02607 347 ProSiteProfiles AP2/ERF domain profile. 40 106 IPR001471 GO:0003700|GO:0006355
Bva02g02607 347 SUPERFAMILY DNA-binding domain 39 107 IPR016177 GO:0003677
Bva02g02607 347 Gene3D AP2/ERF domain 40 108 IPR036955 GO:0003700|GO:0006355
Bva02g02607 347 Gene3D AP2/ERF domain 141 202 IPR036955 GO:0003700|GO:0006355
Bva02g02607 347 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Bva02g02607 347 PRINTS Ethylene responsive element binding protein signature 182 202 IPR001471 GO:0003700|GO:0006355
Bva02g02607 347 Pfam AP2 domain 141 192 IPR001471 GO:0003700|GO:0006355
Bva02g02607 347 Pfam AP2 domain 40 98 IPR001471 GO:0003700|GO:0006355
Bva02g02607 347 MobiDBLite consensus disorder prediction 1 39 - -
Bva02g02607 347 MobiDBLite consensus disorder prediction 213 264 - -
Bva02g02607 347 SUPERFAMILY DNA-binding domain 141 202 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02607 Bva-Chr2 24276785 24279999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02607 18 231 AP2-EREBP Transcription Factor Family AT5G57390 58.952 1.91e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bva02g02607 AP2 6.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02607 K09285 - rcu:8280276 491.115