Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02601 ATGGTTCTCTTAGGAACCttgttcttcctcttccttcaATACCAAATCTCAACGCTGACTTACTCACTTGTAAGGCATTACCCCCCTTATCACTCTTTGCAAACAGATAAGGCTGCTCTTTTGGAATTCAAGAGAACAATCACGCATGATCCGTATTCCACACTTGCTAACTGGGATGAAGCTGTTCATGTCTGTAATTTCACAGGTGTTAGATGTGGTAATTTCCAACACCGCGTGAAATGGCTAATCCTGGAGGATAAGCATCTCGTTGGTTTGCTTCCTCCCTTCCTTTCCAATCTCACTGGACTTCAATCCCTTCACATTGTTAACAGTCACTTATATGGAATCGTTCCGCCTGAATTTTCTTCCCTCAAACGTCTCCGGAGTCTCCAGCTTGACGGCAACAATTTGCATGGTTCCATACCAGACTCTCTTTCTCAGCTTCCCAAACTCAAAACGCTACATGTTAGTGGCAACAACATATCCGGTTCGCTTTCTCCATCTCTCTTTCGCAATTGCACTGAGCTAGAAATTGTGGACCTTTCCAGCAACTTCCTCGCCGGTAATGTCCCGGAACAGATTGGAAACTGCCCAAAATTGTGGAGTCTCAGTCTATACAATAATCAATTTACTGGAATACTTCCTCGCTCTTTAGCCAATCTATCAGCACTTGGCAATATTGACATAGAGTACAATTATCTGATTGGTGGATTGCCTACGCAGTTTGTAAGCAGGTGGCCACGACTCCGTTTCCTTCATCTATCGTACAACCCTATGATGAGTCATGATAACAATACCAATCTTGATTCGTTTTTCAATGCTCTTGGAAACTGCACTATTCTAGAGGAGCTTGAATTGGCAGGGATGGACATTGGGGGAAGGTTACCTGATTTCAGCAAACTTGGCAACAAGCTGAAAAGTCTACTACTGCAGGATAACCAAATATTTGGGTCAATTCCTCACAGCATAGCAAATCTTTCTACTCTTTGGACCCTCAATTTAACATCCAATCTTCTAAATGGAACGATTCCTCCGGGGATCAGCAGGTTGTCAAAATTGGAACAACTTTTCTTATCACACAATCTGCACAAAACAGCATTTCCACAAGTATTGTGCGAGTGTCTACACCTGGGTCTGCTAGATCTTTCACACAATGAATTTTCAGGTGAGATTCCAAAAAGTATAGGAAATTTAACTcaactaaattatttgttcCTCAACAATAACCTTCTCTCGGGAAAAGTACCTTCCACTTTAGGACGGTGTACTAATCTGAACAAGCTTGACTTGTCCTATAATAGATTAACAGGTAGCGTCCCACCAGAACTCTCGGGCCTGCACGAAATCCGAATTTTCATAAATCTGTCGCACAATCGCCTAGAAGGGGCTTTGCCAATTGAACTCAGCAAACTAGAAAATGTTCAAGAAATGGATCTTTCATCGAATTACCTAACTGGAACTATCTTCCCTCAGATAGGAAGCTGCATTGCTGCATCCAAGATAGATTTTTCCAACAATCTTCTTCAAGGTGAGCTCCCAGAAAACTTAGGTGATCTGAAGAACCTTGAATCCTTTGATGTTTCGAGAAATCAATTATCTGGATTGATCCCAGCTACTCTGagtaaaattgacaaacttACTTTCCTCAACTTATCATTTAACAACCTGGAAGGAAGGATTCCATCCGGTGGTATTTTCAGTTTAGTGTCAAACTTGTCATTCTTAGGGAATCGACGTCTCTGTGGAACAATTACAGGCATATCCTTGTGTTCACAAAGGAGACACTGGTTTCACACTCGTCTGTTCTTGATTATATTCATCTTAGtcatcttcatttcaactttcCTGTCAACAATTTGCTGTGTAATAGGATGTAAGCGTCTTAAAGTAATCATTTCTTCTCAAAGGGCTGAGGCAGGTAGAAAATCAGTTAGACctgatttgatatataatttccCAAGAATCACATATAAGGAACTATCAGAGGCCACTCAAGGTTTTGATGATCAGAGATTAGTTGGATCAGGTAGCTATGGAGATGTCTACAGAGGAATTCTTCCCGATGAAACACCAATAGCTGTAAAGGTGCTGCATTTGCAATCTGGGAATTCCACCAAGAGTTTTACCAGGGAATGCCAAGTTTTGAAGAGGATTCGACACAGGAACCTGATAAGGATCATCACAGCATGTAGTTTACCTGATTTTAAGGCTCTCGTTCTGCCTTACATGGCCAATGGGAGCTTGGAGAGCCGCCTCTATccttcttctgcttcttcagATTTGACTCTCATGCAGAGGGTCAACATTTGCAGTGACATAGCTGAAGGGATGGCCTACCTACATCATCATTCTCCTGTCAAGGTCATACACTGTGATCTAAAACCAAGCAATGTTCTTCTCAATGATGACATGACAGCTCTAGTTTCTGATTTTGGGATCGCAAGGTTGGTTATCAGTGCTGGAGGAGGAAATGGTGGAGCTATTGAGAACATGGGCAACTCCACTGCAAATTTGTTTTGCGGCTCCATTGGATACATTGCACCAGAATATGGATTTGGATCCAATACATCTACAAAGGGAGATGTATATAGCTTTGGCATTTTAGTCCTTGAGATGGTGACTAGAAAAAGGCCAACAGATGACATATTTGTTGGCGGGTTAAATCTACACAAATGGGTCAAGAACCACTATCACGGAAGGGTAGAGAAAGTGCTAGATCCTAGTTTGGTGACGGCTTCGAGTAATCAAACACCCGAGGTGAAAAAGATGCGGGAGGTTGCAATTGCCGAGTTAACTGAGCTGGGGATTCTTTGCACACAAGAGTCGCCTTCTACAAGGCCAACAATGCTTGATGCAGCAGATGACTTGGATCGTCTCAAAAGTTACCTTAATGGTGAAACAACAGGGACTTTTGCCTCATCACTTGGAATTTCTTCAACTATAGGTGATGATTA 2954 0.4076 MVLLGTLFFLFLQYQISTLTYSLVRHYPPYHSLQTDKAALLEFKRTITHDPYSTLANWDEAVHVCNFTGVRCGNFQHRVKWLILEDKHLVGLLPPFLSNLTGLQSLHIVNSHLYGIVPPEFSSLKRLRSLQLDGNNLHGSIPDSLSQLPKLKTLHVSGNNISGSLSPSLFRNCTELEIVDLSSNFLAGNVPEQIGNCPKLWSLSLYNNQFTGILPRSLANLSALGNIDIEYNYLIGGLPTQFVSRWPRLRFLHLSYNPMMSHDNNTNLDSFFNALGNCTILEELELAGMDIGGRLPDFSKLGNKLKSLLLQDNQIFGSIPHSIANLSTLWTLNLTSNLLNGTIPPGISRLSKLEQLFLSHNLHKTAFPQVLCECLHLGLLDLSHNEFSGEIPKSIGNLTQLNYLFLNNNLLSGKVPSTLGRCTNLNKLDLSYNRLTGSVPPELSGLHEIRIFINLSHNRLEGALPIELSKLENVQEMDLSSNYLTGTIFPQIGSCIAASKIDFSNNLLQGELPENLGDLKNLESFDVSRNQLSGLIPATLSKIDKLTFLNLSFNNLEGRIPSGGIFSLVSNLSFLGNRRLCGTITGISLCSQRRHWFHTRLFLIIFILVIFISTFLSTICCVIGCKRLKVIISSQRAEAGRKSVRPDLIYNFPRITYKELSEATQGFDDQRLVGSGSYGDVYRGILPDETPIAVKVLHLQSGNSTKSFTRECQVLKRIRHRNLIRIITACSLPDFKALVLPYMANGSLESRLYPSSASSDLTLMQRVNICSDIAEGMAYLHHHSPVKVIHCDLKPSNVLLNDDMTALVSDFGIARLVISAGGGNGGAIENMGNSTANLFCGSIGYIAPEYGFGSNTSTKGDVYSFGILVLEMVTRKRPTDDIFVGGLNLHKWVKNHYHGRVEKVLDPSLVTASSNQTPEVKKMREVAIAELTELGILCTQESPSTRPTMLDAADDLDRLKSYLNGETTGTFASSLGISSTIGDD 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02601 984 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Bva02g02601 984 Gene3D Ribonuclease Inhibitor 32 175 IPR032675 -
Bva02g02601 984 CDD STKc_IRAK 673 959 - -
Bva02g02601 984 SMART serkin_6 667 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02601 984 Gene3D Ribonuclease Inhibitor 176 241 IPR032675 -
Bva02g02601 984 Gene3D Ribonuclease Inhibitor 242 591 IPR032675 -
Bva02g02601 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Bva02g02601 984 Pfam Leucine Rich Repeat 521 542 IPR001611 GO:0005515
Bva02g02601 984 Pfam Protein kinase domain 668 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02601 984 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Bva02g02601 984 Gene3D Phosphorylase Kinase; domain 1 649 742 - -
Bva02g02601 984 SUPERFAMILY RNI-like 78 361 - -
Bva02g02601 984 SUPERFAMILY Protein kinase-like (PK-like) 646 956 IPR011009 -
Bva02g02601 984 Gene3D Transferase(Phosphotransferase) domain 1 743 970 - -
Bva02g02601 984 ProSiteProfiles Protein kinase domain profile. 667 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02601 984 PANTHER OS04G0122200 PROTEIN 25 965 - -
Bva02g02601 984 Pfam Leucine rich repeat 377 435 IPR001611 GO:0005515
Bva02g02601 984 Pfam Leucine rich repeat 175 234 IPR001611 GO:0005515
Bva02g02601 984 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Bva02g02601 984 PANTHER OS06G0186100 PROTEIN 25 965 - -
Bva02g02601 984 SUPERFAMILY L domain-like 329 582 - -
Bva02g02601 984 SMART LRR_typ_2 148 172 IPR003591 -
Bva02g02601 984 SMART LRR_typ_2 398 422 IPR003591 -
Bva02g02601 984 SMART LRR_typ_2 543 568 IPR003591 -
Bva02g02601 984 SMART LRR_typ_2 519 542 IPR003591 -
Bva02g02601 984 SMART LRR_typ_2 197 220 IPR003591 -
Bva02g02601 984 SMART LRR_typ_2 124 147 IPR003591 -
Bva02g02601 984 SMART LRR_typ_2 423 446 IPR003591 -
Bva02g02601 984 SMART LRR_typ_2 326 350 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02601 Bva-Chr2 24252241 24253028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02601 34 946 Receptor kinase-like Gene Family AT3G47570 35.217 1.57e-167 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva02g02601 Pkinase 4.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02601 - - gmx:100815766 1424.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02601 02 24252241 24253028 Bva02g02601 02 24252241 24253028 ECH