Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02584 ATGGACGGCTTCTTCGCTCTAATTTGTCCTAATTCCCCACCAGTATGGGATGGAAAGCGATTCTCCGAGTGTTTTGAAGACATATATCCTTATTGCTTTTCAGATTTTTGTTTCATTTTAGGTTTTGGGGTGAATGTAGTGACTATTATTGTCATAGTTGTGCTTGGAATTACTCAGAAGAGTGCCCGTGGAAATAAAAGATTACATACGCAGATAACCGGTTTAGAGAAATTTGTCCTGCGTTTTGTACCAGCTGTTGGAGCATGTCTGTCAGTCATAAACATAATTATACTCTGCAAGACAGGATTTCATCAACACTTTGTTGGATATCATAAATGGTTTTATAACTGTTCAGAGTTGATGGTCTGGGCAAATATCATTGTCTTCACGAAGTGTGGAAACAGTCATTACATATTCTGCAACCGAATCTTATGTTTCTGGTGGATTCTGAAACCGCTATTGGGAATATTCCATTTGTGGACAATGTTTCCATCATTGGAGTTCCTGATGTGCATTATGGAAAGCTCTTCTGTTATATTGAGTTCCACATTCTGTATCGCTATCAATATGGTCAGGGCAAAGAAATTATCGTCCAAGAGCAGTTCATTGGGAGATCCACTTCTTTCTAATGACATGGACCTGGAGGAAGGCATCCATGGTGACTTTGCAGAAAACTGGAACTTTTGGGATTTGTTGACTTTCAGATTCATAACAACAGTAATCAATCATGGTGCCGTAAAGCAACTGAATCCTGAAGATTTGCTTCCACTGCCTACTGATTTGGATCCTTCTTCTtgtcataatataattttagtctGCTGGCATGCTCATCTGAGTGATCATACTTTAAATCCATCTTTATTTAGAGCACTCTGTTGTGCATATGGATGGCCATACCTCCGCCTGGGTTTACTAAAGGTGGTTAATGATTGCATTGGTTTTGTGGGACCATTACTTCTCAACAAGCTGATCCGGTTTCTTCAACAAGGCTCTGATAATTTGGATGGGTATTTACTTGCAATATCCTTGGGTCTTACATCCACCATTAAATCCTTTTTAGATACACAATATTCCTTTCGTCTTTCCAAGCTGAAGTTAAAGCTACGGTCTAGTATCATGACTCTTATCTATCAGAAGTGTCTCTATCTGAACCTAGCAGAACGTTCAAAATTCTCTAGTGGGGAAATTCAGACATTTATGTCTGTAGATGCTGACCGAACTGTCAACTTATGTAATAGTTTCCATGATATTTGGAGcCTGCCTTTACAAATTGGGGTGGCACTTTGTCTTCTGTATACTCAAGTCAAATTTGCGTTTGTTTCTGGATTAGCAATAACCATTTTATTGATACCAGTGAATAAATGGATATCAGAATTGATTGCAAATGCTACCAAGAAAATGATGGAGCAGAAGGATGAAAGGATAAGGAGGACGGGAGAACTCCTGACTTTTATCCGCACTTTGAAAATGTATGGGTGGGAGCTTCTTTTTTCTGACTGGTTGATGGAGACAAGATCTTTGGAAGTGAAACACTTAGCTACTCGGAAATACTTAGATGCATGGTGCGTATTCTTTTGGGCTACCACACCAACtctcttttcacttttcacaTTTGGACTCTATGCATTGATGGGACATCAACTTGATGCTGCAACGGTATTCACTTGCCTTGCCTTGTTTAATACATTGATTTCACCCCTGAATTCATTCCCCTGGGTGATTAATGGATTGATTGATGCCTTTATATCTTCGAGACGGCTGAGCAGGTTTCTTGCTTGTCCTGAACAAAAGTCAGGCGTGGGAGAGACCATTagttcttcttcatcatcaatcCTGAGTGGCCAACCTGATTCTTTACAAGATTTATCCATCATTGCCCAAGATGCATGCTGTACGTGGTCTAGCAGTGGTGAAAAAGAATTGAGCATTGTGCTGAATCACGTGACTCTACACCTGCCAAAGGGTTCCTTTGTTGCAGTTATTGGAGAGATTGGTTCAGGTAAATCATCCCTGATATATTCAATTGTTGGAGAAATGAGGCTTGCTAATGGATCAATTTTTTCCAACGGATCAATGGCCTATGTACCACAGGTCCCATGGATTCTATCTGGAACAATACGTGACAACATATTATTTGGGAAAAATTATGATCCCAAAAGGTATGCAGATACTGTACAGGCATGTGCATTAGATGTTGATATCTCATTGATGCTTGGAGGTGATATGGCTTATATTGGAGAGAAAGGAGTTAATTTATCTGGTGGACAGAGAGCTCGTCTTGCATTGGCAAGGGCAGTGTATCATGGATCTGATATCATTTTGCTTGACGATGTCCTGAGTGCAGTTGATGCACAAGTTGCTCGATGGATCTTAAATAATGTCATTCTGGGTCCTCTTATGCAGGGGAAAACACGATTGCTCTGTACCCATAATGTTCAGGCTATATCTTCTGCTGACATAATTGTTTTGATGGACAAAGGGCATGTAAAGTGGGTGGGAAGTGTGGCCGACTTcccattttcttcatatttagcATTCTCCCAGTTAAATGAACTTGATTCAGCTTTACACAGTCAAGGCCAATCTTGCAGCTCAAACTCTTCCAAGTTCAAAGAGCATTCCCGTTCAGATAGAGATTTTATCCATTCTGTGGAGAGAACAGAGGAGATCATTGAAGTTGAGCAGAGGAAAGAAGGCAAAGTGGAACTTAGAGTGTATAAGAACTATGCTGCGTTCACTGGTTGGTTCATCACAGTTGTAATATGCCTGTCGGCTATTCTGATGCAAGCCTCTCGTAATGGAAATGATCTGTGGTTATCATTTTGGGTTGATACAACAGGAAGCAGTCAAAAGAGATACGCTGTGTCCTTTTATCTGGCTGTACTATGTTTCTTTTGTATCATAAATTCCTTTCTCACATTGATGAGGGCATTCTCCTTTGCATTTGGTGGCTTACAAGCGGCAACTAAGTTGCACAATAAACTGCTCAGTAACCTCATTAAAGCACCTGTGCGATTCTTTGATCAGACACCGGCTGGAAGAATACTGAACAGGTTTTCTTCAGATCTTTATACAATTGATGATTCCCTTCCCTTCATTTTGAACATTCTTCTGGCTAACTTTGTTGGCCTGTTGGGTATTGTTGTAGTTTTGTCGTATGTACAGGTCTTCTTCCTACTCCTACTATTGCCATTTTGGTATATCTACAGTAGACTCCAGTTCTTTTACCGGTCAACGTCAAGAGAATTGCGACGACTCGACAGTGTTTCTCGTTCCCCAATATATACATCTTTCACTGAAACACTTGATGGATCATCAACTATAAGGGCATTTAAATCTGAGGACGTTTTCTTTGCCAAATTCACTGAACACGTAACCTTATATCAGAAAACTTCTTACACGGAGACAGCAGCGAGTTTATGGCTTTCGTTGCGTCTTCAGTTGTTAGCCGCATTCATTGTCTCATTTATAGCTATCATGGCTGTTATTGGATCTCATGGCAGTCTACCGATCAACTTTGGTACCCCAGGGCTGGTAGGCTTGGCACTATCTTACGCAGCTCCAATTGTGTCCTTGTTGGGGAGTTTCTTAACAAGTTTTACTGAAACGGAAAAGGAAATGGTTTCAGTTGAAAGAGCTCTTCAATATATGGACATTCCTCAAGAAGAATTAGTTGGATGCTTATCCTTGAACCCAGATTTCCCAAATCAAGGAGTAATTGAATTCCAGGATGTTACTTTGAAATATATGCCATCTTTGCCGGCTGCACTCTGTAATCTCACTTTTACCATTGCCGGAGGAACACAGGTTGGAATAATTGGAAGAACAGGTGCAGGAAAGTCTAGTGTGTTGAATGCCCTTTTTCGCCTTGCCCCAATCTGCTCAGGCTCCATCATGGTTGATGGAAtagacattaaaaatattcctgTCAGAGAACTACGTGCGTATTTTGCTGTTGTTCCTCAGAGTCCATTCTTATTTGAAGGATCATTAAGGGATAATCTAGATCCATTCCAAATGAATGATGACTTAAAAATTTGGAATGCACTGGACAAGTGCCATATGAAAGAGGAGGTAGAAGCGGCTGGAGGGCTAGATATTGTCATAAAGGAATCTGGGGTCTCATTTTCTGTTGGTCAACGGCAGCTTCTTTGCCTTGCACGTGCACTTCTCAAATCTTCCAAGGTTCTCTGTTTGGATGAATGCACAGCCAATGTAGATACTCAAACCGCTTCGCTGCTGCAGAGCACCATATCAAGCGAATGCAGAGGCATAACAGTAGTCACAATTGCTCACAGGATTTCGACAGTCTCGAATATGGACAACATATTAATTCTTGATCATGGGAACCTGGTAGAACAAGGAAACCCACAGATTCTCCTGAAAGATGACTCCTCcatattttcaagttttgcTAAGGCATCATCCATGTA 4433 0.3991 MDGFFALICPNSPPVWDGKRFSECFEDIYPYCFSDFCFILGFGVNVVTIIVIVVLGITQKSARGNKRLHTQITGLEKFVLRFVPAVGACLSVINIIILCKTGFHQHFVGYHKWFYNCSELMVWANIIVFTKCGNSHYIFCNRILCFWWILKPLLGIFHLWTMFPSLEFLMCIMESSSVILSSTFCIAINMVRAKKLSSKSSSLGDPLLSNDMDLEEGIHGDFAENWNFWDLLTFRFITTVINHGAVKQLNPEDLLPLPTDLDPSSCHNIILVCWHAHLSDHTLNPSLFRALCCAYGWPYLRLGLLKVVNDCIGFVGPLLLNKLIRFLQQGSDNLDGYLLAISLGLTSTIKSFLDTQYSFRLSKLKLKLRSSIMTLIYQKCLYLNLAERSKFSSGEIQTFMSVDADRTVNLCNSFHDIWSLPLQIGVALCLLYTQVKFAFVSGLAITILLIPVNKWISELIANATKKMMEQKDERIRRTGELLTFIRTLKMYGWELLFSDWLMETRSLEVKHLATRKYLDAWCVFFWATTPTLFSLFTFGLYALMGHQLDAATVFTCLALFNTLISPLNSFPWVINGLIDAFISSRRLSRFLACPEQKSGVGETISSSSSSILSGQPDSLQDLSIIAQDACCTWSSSGEKELSIVLNHVTLHLPKGSFVAVIGEIGSGKSSLIYSIVGEMRLANGSIFSNGSMAYVPQVPWILSGTIRDNILFGKNYDPKRYADTVQACALDVDISLMLGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIILLDDVLSAVDAQVARWILNNVILGPLMQGKTRLLCTHNVQAISSADIIVLMDKGHVKWVGSVADFPFSSYLAFSQLNELDSALHSQGQSCSSNSSKFKEHSRSDRDFIHSVERTEEIIEVEQRKEGKVELRVYKNYAAFTGWFITVVICLSAILMQASRNGNDLWLSFWVDTTGSSQKRYAVSFYLAVLCFFCIINSFLTLMRAFSFAFGGLQAATKLHNKLLSNLIKAPVRFFDQTPAGRILNRFSSDLYTIDDSLPFILNILLANFVGLLGIVVVLSYVQVFFLLLLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDVFFAKFTEHVTLYQKTSYTETAASLWLSLRLQLLAAFIVSFIAIMAVIGSHGSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERALQYMDIPQEELVGCLSLNPDFPNQGVIEFQDVTLKYMPSLPAALCNLTFTIAGGTQVGIIGRTGAGKSSVLNALFRLAPICSGSIMVDGIDIKNIPVRELRAYFAVVPQSPFLFEGSLRDNLDPFQMNDDLKIWNALDKCHMKEEVEAAGGLDIVIKESGVSFSVGQRQLLCLARALLKSSKVLCLDECTANVDTQTASLLQSTISSECRGITVVTIAHRISTVSNMDNILILDHGNLVEQGNPQILLKDDSSIFSSFAKASSM 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02584 1477 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 579 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g02584 1477 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 619 851 IPR003439 GO:0005524
Bva02g02584 1477 SMART AAA_5 1266 1450 IPR003593 -
Bva02g02584 1477 SMART AAA_5 654 828 IPR003593 -
Bva02g02584 1477 Pfam ABC transporter 1258 1404 IPR003439 GO:0005524
Bva02g02584 1477 ProSitePatterns ABC transporters family signature. 1376 1390 IPR017871 GO:0005524
Bva02g02584 1477 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 919 1205 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g02584 1477 Gene3D ABC transporter type 1, transmembrane domain 882 1223 IPR036640 GO:0005524|GO:0016021
Bva02g02584 1477 CDD ABC_6TM_MRP7_D2_like 918 1217 - -
Bva02g02584 1477 CDD ABCC_MRP_domain1 624 827 - -
Bva02g02584 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1235 1465 IPR027417 -
Bva02g02584 1477 ProSitePatterns ABC transporters family signature. 752 766 IPR017871 GO:0005524
Bva02g02584 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 838 IPR027417 -
Bva02g02584 1477 CDD ABC_6TM_MRP7_D1_like 302 587 - -
Bva02g02584 1477 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 152 1457 - -
Bva02g02584 1477 SUPERFAMILY ABC transporter transmembrane region 288 587 IPR036640 GO:0005524|GO:0016021
Bva02g02584 1477 Gene3D - 608 870 IPR027417 -
Bva02g02584 1477 Pfam ABC transporter 645 777 IPR003439 GO:0005524
Bva02g02584 1477 PANTHER MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 7 152 1457 - -
Bva02g02584 1477 Gene3D ABC transporter type 1, transmembrane domain 289 595 IPR036640 GO:0005524|GO:0016021
Bva02g02584 1477 SUPERFAMILY ABC transporter transmembrane region 915 1222 IPR036640 GO:0005524|GO:0016021
Bva02g02584 1477 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1240 1473 IPR003439 GO:0005524
Bva02g02584 1477 Gene3D - 1227 1473 IPR027417 -
Bva02g02584 1477 Pfam ABC transporter transmembrane region 303 567 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g02584 1477 Pfam ABC transporter transmembrane region 920 1167 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g02584 1477 CDD ABCC_MRP_domain2 1238 1457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02584 Bva-Chr2 24170970 24185696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02584 644 883 Calmodulin-binding Proteins AT2G36910 26.667 1.13e-20 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02584 K05674 - gmx:100814181 2259.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02584 02 24170970 24185696 Bva02g02584 02 24170970 24185696 ECH