Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva02g02578 | ATGGATTATTCTTCTTGTATAAATACTTCCTTGGATCTCAACATTAATCCTCTCAGAGTTCATGAAGAAGTTCCCATAAAGgagatagaaagaaattttttctcGTTGGGGAGGAAGCCTTCtgtaaaagaaaagTCTGCTGGTGACCTGGTAGAGGAACTGAAGAGGGTGAATGCAGAAAACAAGAAGTTAACAGAAATGCTTACAGAGATGTGTGAGAATTACAACACTTTGCGAAGCCACTTGATGGAATAtatgagaaaggaaaaggagtCAAGccaatcaaagaaaagaaagtctGAAAGCAGCAATAACGATGGTAATCTAATGGGAATTAATGGAAACTCCGAAAGCAGCTCAACTGACGAAGAATCATGCAAGAAGTCAAGGGAAGAGACTGTCAAAGCAAAAATTTCAAGAGCTTATGTCAGGACTGAGGCATCTGATACAAGCCTTATTGTAAAGGATGGATATCAATGGAGGAAATATGGACAAAAGGTGACAAGAGATAATCCCTCTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAACCTGCCCCGTCAAAAAGAAGGTGCAAAGGAGTGTGGATGATCAGTCTATTCTGGTGGCAACTTATGAAGGAGAGCACAATCATCCTCACCCTTCTCAGATGGAGGTCACATCTGGTTCCAGCCGTTCTATGACACTTGGTTCAGTCCCACGTTCAGCATCTCCCAGCTCTTTAGCCCCAACAGTTACCCTTGACTTGACAAAATCTAAGTCCAGAAATGACTCCAAAATTCCAAAACCAAAGATTGATTCACCGGAAGTGCCGCAGATTTTGGTCGAACATATGGCTACTTCCTTGACCAAGGATCCCAACTTCAGAGCAGCACTTGTCGCTGCTATTTCAGGAAAAATGTTGCATAAGTA | 914 | 0.3917 | MDYSSCINTSLDLNINPLRVHEEVPIKEIERNFFSLGRKPSVKEKSAGDLVEELKRVNAENKKLTEMLTEMCENYNTLRSHLMEYMRKEKESSQSKKRKSESSNNDGNLMGINGNSESSSTDEESCKKSREETVKAKISRAYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPTCPVKKKVQRSVDDQSILVATYEGEHNHPHPSQMEVTSGSSRSMTLGSVPRSASPSSLAPTVTLDLTKSKSRNDSKIPKPKIDSPEVPQILVEHMATSLTKDPNFRAALVAAISGKMLHK | 304 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva02g02578 | 304 | Gene3D | WRKY domain | 135 | 216 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bva02g02578 | 304 | ProSiteProfiles | WRKY domain profile. | 149 | 215 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva02g02578 | 304 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 1 | 303 | IPR044810 | GO:0003700 | |
Bva02g02578 | 304 | MobiDBLite | consensus disorder prediction | 215 | 252 | - | - | |
Bva02g02578 | 304 | MobiDBLite | consensus disorder prediction | 86 | 133 | - | - | |
Bva02g02578 | 304 | MobiDBLite | consensus disorder prediction | 86 | 103 | - | - | |
Bva02g02578 | 304 | SUPERFAMILY | WRKY DNA-binding domain | 151 | 215 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bva02g02578 | 304 | MobiDBLite | consensus disorder prediction | 104 | 120 | - | - | |
Bva02g02578 | 304 | PANTHER | TRANSCRIPTION FACTOR | 1 | 303 | - | - | |
Bva02g02578 | 304 | Coils | Coil | 47 | 74 | - | - | |
Bva02g02578 | 304 | SMART | WRKY_cls | 154 | 214 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva02g02578 | 304 | Pfam | WRKY DNA -binding domain | 155 | 213 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva02g02578 | 304 | MobiDBLite | consensus disorder prediction | 208 | 268 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva02g02578 | Bva-Chr2 | 24148315 | 24150420 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva02g02578 | 4 | 304 | WRKY Transcription Factor Family | AT1G80840 | 54.430 | 1.34e-103 | 303 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Bva02g02578 | WRKY | 2e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva02g02578 | - | - | gmx:100798375 | 457.603 |