Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02578 ATGGATTATTCTTCTTGTATAAATACTTCCTTGGATCTCAACATTAATCCTCTCAGAGTTCATGAAGAAGTTCCCATAAAGgagatagaaagaaattttttctcGTTGGGGAGGAAGCCTTCtgtaaaagaaaagTCTGCTGGTGACCTGGTAGAGGAACTGAAGAGGGTGAATGCAGAAAACAAGAAGTTAACAGAAATGCTTACAGAGATGTGTGAGAATTACAACACTTTGCGAAGCCACTTGATGGAATAtatgagaaaggaaaaggagtCAAGccaatcaaagaaaagaaagtctGAAAGCAGCAATAACGATGGTAATCTAATGGGAATTAATGGAAACTCCGAAAGCAGCTCAACTGACGAAGAATCATGCAAGAAGTCAAGGGAAGAGACTGTCAAAGCAAAAATTTCAAGAGCTTATGTCAGGACTGAGGCATCTGATACAAGCCTTATTGTAAAGGATGGATATCAATGGAGGAAATATGGACAAAAGGTGACAAGAGATAATCCCTCTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAACCTGCCCCGTCAAAAAGAAGGTGCAAAGGAGTGTGGATGATCAGTCTATTCTGGTGGCAACTTATGAAGGAGAGCACAATCATCCTCACCCTTCTCAGATGGAGGTCACATCTGGTTCCAGCCGTTCTATGACACTTGGTTCAGTCCCACGTTCAGCATCTCCCAGCTCTTTAGCCCCAACAGTTACCCTTGACTTGACAAAATCTAAGTCCAGAAATGACTCCAAAATTCCAAAACCAAAGATTGATTCACCGGAAGTGCCGCAGATTTTGGTCGAACATATGGCTACTTCCTTGACCAAGGATCCCAACTTCAGAGCAGCACTTGTCGCTGCTATTTCAGGAAAAATGTTGCATAAGTA 914 0.3917 MDYSSCINTSLDLNINPLRVHEEVPIKEIERNFFSLGRKPSVKEKSAGDLVEELKRVNAENKKLTEMLTEMCENYNTLRSHLMEYMRKEKESSQSKKRKSESSNNDGNLMGINGNSESSSTDEESCKKSREETVKAKISRAYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPTCPVKKKVQRSVDDQSILVATYEGEHNHPHPSQMEVTSGSSRSMTLGSVPRSASPSSLAPTVTLDLTKSKSRNDSKIPKPKIDSPEVPQILVEHMATSLTKDPNFRAALVAAISGKMLHK 304
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02578 304 Gene3D WRKY domain 135 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva02g02578 304 ProSiteProfiles WRKY domain profile. 149 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g02578 304 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 303 IPR044810 GO:0003700
Bva02g02578 304 MobiDBLite consensus disorder prediction 215 252 - -
Bva02g02578 304 MobiDBLite consensus disorder prediction 86 133 - -
Bva02g02578 304 MobiDBLite consensus disorder prediction 86 103 - -
Bva02g02578 304 SUPERFAMILY WRKY DNA-binding domain 151 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva02g02578 304 MobiDBLite consensus disorder prediction 104 120 - -
Bva02g02578 304 PANTHER TRANSCRIPTION FACTOR 1 303 - -
Bva02g02578 304 Coils Coil 47 74 - -
Bva02g02578 304 SMART WRKY_cls 154 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g02578 304 Pfam WRKY DNA -binding domain 155 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva02g02578 304 MobiDBLite consensus disorder prediction 208 268 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva02g02578 Bva-Chr2 24148315 24150420 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02578 4 304 WRKY Transcription Factor Family AT1G80840 54.430 1.34e-103 303
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva02g02578 WRKY 2e-23 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02578 - - gmx:100798375 457.603