Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02574 atggctGTCCCGGGTTCAGGTTCTGGGCAGCCGCAATTCATTTCCAGCACTGGGAACCGCAGCTTCTCAAATGCGTCACTGATTGAGAACTCAGATACTGATCAGATTATCGTGCCTGATAGAAAAAGCTGGAAAAACTTATTTGCATACATGGGTCCtggttttcttgtttctattgCCTATATAGACCCAGGAAActTTGAAACGGATCTTCAGTCAGGGGcacaatataaatatgagTTACTTTGGATCATCCTGGTGGCCTCATGTGCTGCTCTTATAATTCAGTCCATGGCAGCAAATCTGGGTGTTGTGACTGGAAAGCATTTAGCAGAGCACTGTAGAGCAGAATATGCTCGGCTTCCAAACTTTATCCTTTGGGTTATTGCTGAAATTGCAATAGTAGCATGTGATATTCCTGAAGTGATCGGAACAGCCTTTGCATTGAACATGCTCTTCAATATACCTGTTTGGATTGGGGTTCTTTTGACAGGGCTCAGTACATTGATGCTTTTAGCATTACAGCAATATGGGGTGAGGAAACTTGAATTTCTGATCGCATTTCTCGTATTTACAATTGCTGCATGCTTTCTTGTTGAGCTTGGGTATGCAAAGCCTGATTCCAAAGAAGTTCTCAAGGGTCTTTTTGTACCACAACTTAGAGGGAGTGGTGCTACTGGTCTCGCTATTTCACTCCTTGGAGCTATGGTTATGCCGCACAATCTCTTCCTCCACTCGGCATTGGTGCTTTCCAGGAAAATACCACGATCAGTTCGTGGAATTAAAGAAGCTTGCAGATTTTACCTGATAGAAAGTGCTTTTGCTCTTCTGGTGGCCTTCCTCATAAATGTGTCTGTTATTTCCGTAAGTGGTGCAGTTTGCAATTCTTCAAACTTAAATTCAGAAGATGAGGAGAGCTGTCGGGATTTGGACCTCAACAAAGCGTCCTTTTTACTAAGAAATGTGTTGGGGAAATGGAGTTCAAAACTGTTTGGAATCGCTTTGCTTGCATCAGGACAGAGCTCTACTATCACAGGAACATATGCAGGGCAGTATGTCATGCAGGGATTTCTTGACTTGAGACTAGAGCCATGGATACGTAACCTTCTAACACGATGCTTAGCCATAGTCCCTAGTTTGATAGTTGCTGTCATTGGTGGCTCTGCTGGCGCTGGGAAGCTAATTATTATTGCATCTATGATTTTATCATTTGAGCTTCCTTTTGCTCTGATTCCACTCCTCAAGTTCACTAGCAGCAAAGGCAAGATGGGAGCACATGCCAACTCTAAAACGATTTCAGCTGTAACTTGGGTCATTGGTTCCCTCATCATGgccataaatatatattttttactgacCAATTTCATCAAGCTGCTACTTCATAGCCACATAGAGGTGGTGGGTAAGGTGTTTCTGGGGATATTAGGATTTTCTGGCGTGGCTCTGTACTTGGCCGGCATTGCATATCTGGTGTTTCGAAAGAACAGGGAGGCTACGAACCTTTTGGCACTAACATGGCCAGAAAATCGGCAAATGACAAACGAACAAGGCAACGAACCAGTTTATTGCCTCCCAAGAGAAGACATAGTAAGCATGCAACTGCCTCAAAGGAGCAACCCGTCTGGTATTGACTG 1634 0.4241 MAVPGSGSGQPQFISSTGNRSFSNASLIENSDTDQIIVPDRKSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSMAANLGVVTGKHLAEHCRAEYARLPNFILWVIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLMLLALQQYGVRKLEFLIAFLVFTIAACFLVELGYAKPDSKEVLKGLFVPQLRGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYLIESAFALLVAFLINVSVISVSGAVCNSSNLNSEDEESCRDLDLNKASFLLRNVLGKWSSKLFGIALLASGQSSTITGTYAGQYVMQGFLDLRLEPWIRNLLTRCLAIVPSLIVAVIGGSAGAGKLIIIASMILSFELPFALIPLLKFTSSKGKMGAHANSKTISAVTWVIGSLIMAINIYFLLTNFIKLLLHSHIEVVGKVFLGILGFSGVALYLAGIAYLVFRKNREATNLLALTWPENRQMTNEQGNEPVYCLPREDIVSMQLPQRSNPSGID 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02574 544 Hamap Divalent metal cation transporter MntH [mntH]. 39 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g02574 544 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g02574 544 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g02574 544 PRINTS Natural resistance-associated macrophage protein signature 399 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g02574 544 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g02574 544 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g02574 544 PRINTS Natural resistance-associated macrophage protein signature 179 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g02574 544 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g02574 544 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 10 544 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g02574 544 PANTHER METAL TRANSPORTER NRAMP1 10 544 - -
Bva02g02574 544 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva02g02574 544 Pfam Natural resistance-associated macrophage protein 67 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02574 Bva-Chr2 24126407 24130779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02574 15 537 Inorganic Solute Cotransporters AT1G15960 81.071 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02574 K21398 - gmx:100797298 937.176