Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02571 ATGGTGTTCTCATTGTTCAGAAACTTTTTCTTATGCAGTGAAGATGCTGTTGTTCCAGCTGAGACAGCTGCTGCAATTCCAGGTGAGCCAATGGACATCATGACTGCCTTGCAGCTTGTGCTGAGAAAATCACTGGCTTATGGTGGTCTTGCTCGAGGTCTTCACGAAGGTGCAAAAGTGATTGAAAAACATGCTGCACAGCTCTGTGTTCTGGCGGAAGATTGTGACCAAGCTGACTATGTTAAACTGGTCAAAGGCCTTTGTGCTGAGCACAGTGTCAGCCTCTTGACAGTTCCGAATGCAAAGACCCTTGGAGAGTGGGCTGGTTTGTGCAAGATAGATTCAGAAGGCAAGGCTAGAAAGGTAGTCGGTTGTGGCTGTGTGGTTGTCAAGGATTTTGGAGAGGAGCACGAAGCATATAATGTCGTTTTGCAGCACGTGAAATCACACTG 452 0.4712 MVFSLFRNFFLCSEDAVVPAETAAAIPGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQADYVKLVKGLCAEHSVSLLTVPNAKTLGEWAGLCKIDSEGKARKVVGCGCVVVKDFGEEHEAYNVVLQHVKSH 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02571 150 PANTHER 40S RIBOSOMAL PROTEIN S12 14 150 - -
Bva02g02571 150 SUPERFAMILY L30e-like 30 148 IPR029064 -
Bva02g02571 150 ProSitePatterns Ribosomal protein S12e signature. 36 54 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva02g02571 150 PANTHER 40S RIBOSOMAL PROTEIN S12 14 150 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva02g02571 150 Gene3D - 18 150 IPR029064 -
Bva02g02571 150 PRINTS Ribosomal protein S12E family signature 54 70 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva02g02571 150 PRINTS Ribosomal protein S12E family signature 95 116 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva02g02571 150 PRINTS Ribosomal protein S12E family signature 120 133 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva02g02571 150 PRINTS Ribosomal protein S12E family signature 40 53 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva02g02571 150 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 36 129 IPR004038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02571 Bva-Chr2 24108739 24109758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02571 26 150 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 72.800 6.53e-64 190