Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02568 ATGGACAATGAGGAAATTCCCTCAATCCCCTCAACACCTGCAACACCAGGTACTCCTGGTGCTCCTCTCTTCGGTGGTTTCAAGGGGGAGAGAACTGGAAATGGTATTGTTAGGAAATCACTGCTGAAAAATTGTAGGTGCTTTGGTGTTGAAGAATGGACCTTAGAAGAAGGAGCCTTACCTAGAGTCTCCTGCTCATTGCCACCCCCGCCTGTCTCACTTGCAAGAAAGATAGGAGCTGAGTTCATAGGCACTCTCATTCTCATGTTTGCTGGGACAGCTGCTGCTATTGTGAACCAAAAGACGCAAGGTGCAGAAACTCTAATTGGATGTGCTGCCACCACTGGCCTTGCAGTTATGATCGTGATCCTCTCCACTGGACACATCTCTGGAGCTCATCTCAACCCTGCTCTCACCATTTCTTTTGCTGCACTAAAACACTTCCCATGGAAACACGTGCCTGCTTATATTGCCGCACAAGTTTTGGCGTCTATATGCGCTGCATTTGCGCTAAAGGGGATATTCCACCCCTTTATGGGTGGTGGTGTCACCGTTCCTTCTGGAGGTTATGCTCAGGCTTTTGCTTTAGAGTTCATCATTAGCTTTAATCTCATGTTCGTTGTCACTGCAGTGGCCACCGACACAAGAGCTGTGGGAGAGCTTGCGGGAATCGCGGTGGGAGCCACTGTCATGCTCAACATACTCATAGCCGGGCCAGCAACAGGAGCTTCAATGAACCCAGTGAGAACACTTGGTCCAGCTATAGCTACCAACAACTACAAAGCCATTTGGGTCTATCTCATAGCTCCCATACTCGGAGCTCTGGGTGGGGCAGGTACCTACACTGCGGTCAAGCTGCCTGAAGAAGACGCTGACCCCCAAGCAAAGGATTCAACACCCAGGAGCTTTAGAAGATG 917 0.4984 MDNEEIPSIPSTPATPGTPGAPLFGGFKGERTGNGIVRKSLLKNCRCFGVEEWTLEEGALPRVSCSLPPPPVSLARKIGAEFIGTLILMFAGTAAAIVNQKTQGAETLIGCAATTGLAVMIVILSTGHISGAHLNPALTISFAALKHFPWKHVPAYIAAQVLASICAAFALKGIFHPFMGGGVTVPSGGYAQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGASMNPVRTLGPAIATNNYKAIWVYLIAPILGALGGAGTYTAVKLPEEDADPQAKDSTPRSFRR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02568 305 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva02g02568 305 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva02g02568 305 PRINTS Major intrinsic protein family signature 196 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva02g02568 305 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva02g02568 305 PRINTS Major intrinsic protein family signature 152 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva02g02568 305 PRINTS Major intrinsic protein family signature 227 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva02g02568 305 PANTHER BNAA02G36290D PROTEIN 3 296 - -
Bva02g02568 305 MobiDBLite consensus disorder prediction 1 25 - -
Bva02g02568 305 CDD MIP 76 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva02g02568 305 PANTHER AQUAPORIN NIP2-1 3 296 IPR034294 -
Bva02g02568 305 ProSitePatterns MIP family signature. 133 141 IPR022357 -
Bva02g02568 305 Gene3D Glycerol uptake facilitator protein. 70 298 IPR023271 -
Bva02g02568 305 SUPERFAMILY Aquaporin-like 73 292 IPR023271 -
Bva02g02568 305 Pfam Major intrinsic protein 73 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02568 Bva-Chr2 24090032 24093135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02568 1 305 Major Intrinsic Protein MIP AT1G80760 79.612 5.19e-173 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02568 K09874 - tcc:18595413 472.626