Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02565 ATGCAAACGGAAAGCCAAGATCAAAAGCACCCGCATGATCACTCGGCTCCTCATCTTCTATTAGATCTAAGTCTCTCTAGAAATGATTCTGGTGATGGATCAAAGTCAGAGCTGAATCTCATCAATTGTTTTGATACAAATTCATCAAGGAACTCTTCAGAATCTTCTCAAGGTAATGAGCTGGAGCCAAGGATTTTTTCATGCAACTACTGTCAGAGGAAATTTTATAGCTCTCAGGCTCTTGGAGGGCACCAGAATGCACATAAGCGGGAAAGGACTTTGGCAAAAAGAGGACAAAAATTTGATACTGCAGTTTCAGTGGATTTTGGAAGGTACTCTAACATGGCTTCTCTGCCTTTGCTTGGATTGCATAATAGATCACTTGGGATTCAGGTGCATTCTATGATTACGAAGCCCTCTCATCAAACACCCCTTATTGGTTTCTCTCGCTTCCATACCCAAAATGGGTGGCGGAGGCAGTTTATTGATTCACAACCTGCTATTGGGAAGCTTTCATCACGGAATTTCCATCTTATGTCCGAAACTGAATCATCTTTGGCTGCTGGCATCCCAAGGTTGGATGGAGTTAAAAAGTTTTCTTCTCCAAGAATTGTCACCGAAGGAATAGCAGGTTATTGGCTGGGTGGCATTACCCATTTGAAGAATAAACAAGATGAACTGCAGAAGCTTGACTTGTCCCTGAAACTCTA 710 0.4225 MQTESQDQKHPHDHSAPHLLLDLSLSRNDSGDGSKSELNLINCFDTNSSRNSSESSQGNELEPRIFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQKFDTAVSVDFGRYSNMASLPLLGLHNRSLGIQVHSMITKPSHQTPLIGFSRFHTQNGWRRQFIDSQPAIGKLSSRNFHLMSETESSLAAGIPRLDGVKKFSSPRIVTEGIAGYWLGGITHLKNKQDELQKLDLSLKL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02565 236 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 2 236 - -
Bva02g02565 236 SUPERFAMILY beta-beta-alpha zinc fingers 63 93 IPR036236 -
Bva02g02565 236 Gene3D Classic Zinc Finger 45 112 - -
Bva02g02565 236 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 2 236 IPR044246 GO:0009788
Bva02g02565 236 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Bva02g02565 236 Coils Coil 220 236 - -
Bva02g02565 236 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02565 Bva-Chr2 24078966 24080225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02565 34 236 C2H2 Transcription Factor Family AT5G25160 46.698 3.81e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva02g02565 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02565 - - gmx:100816861 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02351 08 15194450 15195181 Bva02g02565 02 24078966 24080225 ECH
Bva02g02565 02 24078966 24080225 Bva02g02565 02 24078966 24080225 ECH