Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02558 ATGGGACTCgaagaaataaagaaggagAATGTTGATCTTGAGCGAATACCCGTGGAGGAAGTATTCCAAGAACTGCAATGTACGAAAGAAGGTTTGACATCTGATGAAGGGGCAAAGAGATTGCAAATTTTTGGTCCCAACAagttagaagaaaagaagGAAAACAAAGTGCTGAAATTCTTGGGCTTTATGTGGAATCCTTTATCATGGGTGATGGAATCAGCTGCTATTATGGCCATTGCCTTGGCAAACGGAGGGGGCAAACCACCAGATTGGCAGGATTTTGTTGGAATAGTGGCATTGCTTATTATCAACTCTACTATTAGCTTTATAGAAGAGAATAATGCAGGCAATGCTGCTGCAGCACTTATGGCAGGTCTTGCTCCAAAAACCAAgGTTCTAAGAGACGGAAAGTGGAGTGAGCAGGAGGCTGCTATGCTTGTACCGGGAGATATAGTTAGTATTAAATTAGGAGATATCATCCCTGCAGACGCTCGTCTCTTGGAAGGAGATCCACTCAAGATTGATCAATCTGCCCTTACTGGGGAATCATTACCTGTTACCAAACATCCAGGTGATGAAGTCTTCTCTGGATCCACTGTAAAGCAAGGAGAAATTGAGGCTATTGTAATCGCTACTGGAGTACACACCTTCTTTGGTAAGGCTGCTCACTTGGTAGACAGTACTAACAATGAAGGCCACTTCCAAAAGGTATTGACAGCCATTGGCAACTTTTGCATTTGCTCAATTGCTGTTGGGATGATCATAGAGATAATTGTCATGTACCCAATTCAGCGCCGCGCCTATAGGAATGGAATTGACAACCTCTTGGTCCTTCTCATTGGAGGGATTCCAATAGCAATGCCCACAGTCTTGTCAGTAACAATGGCTATTGGCTCTCATCGACTGTCTCAACAAGGTGCTATCACCAAGAGGATGACAGCCATTGAGGAAATGGCTGGGATGGATGTTTTATGTAGTGATAAGACTGGTACTCTAACGCTGAACAAGCTCACAGTAGACAAGACCTTGATTGAGGTTTTCATGAAAGATATGGACAAGGATTCAGTAATATTGTATGGAGCAAGGGCCTCAAGAGTGGAGAATCAAGATGCAATTGATGCTTGCATTGTTGGAATGTTAGGTGACCCCAAGGAGGCCAGAGATGGCATCAAAGAGCACCATTTCCTTCCCTTTAATCCAGTGGACAAGCGTACAGCCATGACATATGAGGATGCCAAGGGCAATTGGCATAGAGTTAGCAAAGGAGCACCAGAGCAGATTATTGCTCTTTGCAATCTCCGCCCTGATGTGGCAAAGAAAGCTCATtcaattattgataaatttgctGAGCGTGGTCTACGTTCTCTCGCTGTTGCCTATCAAgaagtTCCAGAAAAATGTACGGAAAGTGCAGGAGGACCATGGCAGTTTGTAGGTCTCTTGCCTCTTTTTGATCCTCCTAGGCATGATAGTGCTGAGACCATTCGCCGTGCTCTCGGTCTTGGAGTGAACGTTAAGATGATCACCGGTGATCAACTTGCCATTGGAAAAGAGACTGGTCGCAGGCTTGGCATGGGAAGTAACATGTACCCTTCTTCCAGCCTCCTTGGCGATCACAAGGATGAGTCCATAGCTTCTTATTCTATTGATGAGCTTATTGAGAAGGCCGATGGCTTTGCCGGCGTCTTTCCTGAGCACAAATATGAGATTGTGAAGAGACTGCAAGACAGAAAACATATATGTGGGATGACTGGAGATGGTGTAAATGATGCTCCTGCCCTTAAAAAGGCAGATATTGGGATTGCAGTGGCTGATGCAACCGATGCAGCTCGAAGTGCATCTGACATCGTCCTTACAGAGCCAGGTCTGAGTGTGATTGTGAGTGCAGTATTGACAAGTAGAGCCATTTTCCAGAGAATGAAGAATTATACCATTTATGCTGTTTCTATCACAATCCGAATCGTGCTTGGCTTTATGTTGATTGCTCTCATATGGAAATTTGATTTCTCGCCTTTCATGGTTTTGATCATTGCTATACTGAATGATGGGACAATTATGACCATTTCAAAGGACAGGGTGAAGCCATCTCCGATGCCAGATTCTTGGAAGCTTAAGGAGATTTTTGCCACCGGAATAGTGCTTGGTGCTTACTTGGCTGTTATGACTGTTATCTTCTTCTGGGCTGTTTATGCATCTAATTTCTTCCAGGAAAAATTTGGCGTTAGATCTATCCGAGAAAATGAGGGTGAGCTGACAGCAGCTGTCTACCTTCAAGTGAGCATTGTAAGTCAGGCTCTCATCTTTGTCACTCGGTCGCGGAGCTGGTCATTTATTGAACGCCCTGGTCTCTTGCTTGTTAGTGCCTTTCTCATTGCACAGCTGGTTGCCACATTGATTGCTGTTTATGCAAACTGGGGCTTTGCAAGGATGAAAGGAATTGGATGGGGTTGGGCAGGCGTCGTTTGGCTCTACAGcatcattttctatttcccATTGGATGTTATTAAATTCATAATCCGATATGCATTAACTGGGAAAGCATGGAATAACGTTACTGAGAGCAGGATTGCTTTCACATCAAAGAAAGATTATGGAAAGGGAGAGCGAGAAGCACAATGGGCTTTAGCTCAACGCACATTGCATGGCCTAAATCCTCCGGATACAGAGCAAATcttgaaagaaacaaacaactaCAGAGAATTGTCTGAACTTGCTGAACAGGCCAAAAAGCGTGCTGATGTAGCAAGGTA 2753 0.4308 MGLEEIKKENVDLERIPVEEVFQELQCTKEGLTSDEGAKRLQIFGPNKLEEKKENKVLKFLGFMWNPLSWVMESAAIMAIALANGGGKPPDWQDFVGIVALLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAMLVPGDIVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTVKQGEIEAIVIATGVHTFFGKAAHLVDSTNNEGHFQKVLTAIGNFCICSIAVGMIIEIIVMYPIQRRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFMKDMDKDSVILYGARASRVENQDAIDACIVGMLGDPKEARDGIKEHHFLPFNPVDKRTAMTYEDAKGNWHRVSKGAPEQIIALCNLRPDVAKKAHSIIDKFAERGLRSLAVAYQEVPEKCTESAGGPWQFVGLLPLFDPPRHDSAETIRRALGLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGDHKDESIASYSIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGIVLGAYLAVMTVIFFWAVYASNFFQEKFGVRSIRENEGELTAAVYLQVSIVSQALIFVTRSRSWSFIERPGLLLVSAFLIAQLVATLIAVYANWGFARMKGIGWGWAGVVWLYSIIFYFPLDVIKFIIRYALTGKAWNNVTESRIAFTSKKDYGKGEREAQWALAQRTLHGLNPPDTEQILKETNNYRELSELAEQAKKRADVAR 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02558 917 Pfam Cation transporter/ATPase, N-terminus 16 78 IPR004014 -
Bva02g02558 917 Pfam E1-E2 ATPase 128 305 - -
Bva02g02558 917 PANTHER CALCIUM-TRANSPORTING ATPASE 3 917 - -
Bva02g02558 917 SMART Cation_ATPase_N_a_2 12 84 IPR004014 -
Bva02g02558 917 SUPERFAMILY Calcium ATPase, transmembrane domain M 11 843 IPR023298 -
Bva02g02558 917 Gene3D - 897 917 - -
Bva02g02558 917 CDD P-type_ATPase_H 31 838 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva02g02558 917 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 560 673 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g02558 917 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 98 346 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g02558 917 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 31 803 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva02g02558 917 Gene3D - 91 812 - -
Bva02g02558 917 Gene3D - 338 485 IPR023299 GO:0000166
Bva02g02558 917 SUPERFAMILY Calcium ATPase, transduction domain A 129 226 IPR008250 -
Bva02g02558 917 Coils Coil 892 912 - -
Bva02g02558 917 Gene3D - 323 622 IPR023214 -
Bva02g02558 917 PANTHER ATPASE 9, PLASMA MEMBRANE-TYPE 3 917 - -
Bva02g02558 917 Gene3D - 129 213 - -
Bva02g02558 917 SFLD p-type atpase 308 637 IPR044492 -
Bva02g02558 917 ProSitePatterns E1-E2 ATPases phosphorylation site. 328 334 IPR018303 -
Bva02g02558 917 SUPERFAMILY HAD-like 322 632 IPR036412 -
Bva02g02558 917 PRINTS P-type cation-transporting ATPase superfamily signature 480 491 - -
Bva02g02558 917 PRINTS P-type cation-transporting ATPase superfamily signature 585 604 - -
Bva02g02558 917 PRINTS P-type cation-transporting ATPase superfamily signature 176 190 - -
Bva02g02558 917 PRINTS P-type cation-transporting ATPase superfamily signature 502 512 - -
Bva02g02558 917 PRINTS P-type cation-transporting ATPase superfamily signature 326 340 - -
Bva02g02558 917 PRINTS P-type cation-transporting ATPase superfamily signature 608 620 - -
Bva02g02558 917 PRINTS H+-transporting ATPase (proton pump) signature 442 460 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g02558 917 PRINTS H+-transporting ATPase (proton pump) signature 757 778 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g02558 917 PRINTS H+-transporting ATPase (proton pump) signature 585 601 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g02558 917 PRINTS H+-transporting ATPase (proton pump) signature 616 641 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g02558 917 PRINTS H+-transporting ATPase (proton pump) signature 557 573 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva02g02558 917 Pfam haloacid dehalogenase-like hydrolase 322 599 - -
Bva02g02558 917 SFLD C1.7: P-type atpase like 308 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02558 Bva-Chr2 24043564 24050184 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02558 4 917 Primary Pumps ATPases AT1G80660 84.573 0.0 1580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02558 K01535 - zju:107408630 1570.44