Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02553 ATGAATCTTCATGTTCTATTCCTACCCATTGTTCTCTTTTCAGCTTTTCTATATGCTGCACCAGAGCCTGCTATGCCCTCCATTTCTGCCTCTCTTCATGGTCCTCAAAGAGAatccatttttcaattttctgcagaagcagaagctgaATCTCCTGGAATGTCAGAGACTCCAATAGTGCACCACCAGAATTTGAACAAGAGAATTCTAATAGCACTAATTGTTTGTTCTACTCTTCTTGGTGGAATCTTTCTATTCTTATCATATGTTTGGATCAATCGACATAAATACTTAAAGAGGTCCAGCAGGAAAAGCCAAGAGAACATGGAGGCAGCAAACGGGGTGTCCATAAACACTgttaatgttaaatttaattactcaAGGATGGCAGACAAGAAAAGTTCTGTTGCTATATTTGACTTTCAGTTGTTAGAGGCTGCGACAGACAGCTTTTCCAAGAATAATATTGTGGGTGAAAGTGGTTCTAGGCTTGTTTACAGGGCTTGTTTTGATGAACATTTCCAGGCAGCTGTAAAGAAGGGAGATAGTGATGCTGATAGAGAATTTGAGAATGAAGTGAATTGGTTGAGCAAGATAAGGCATCAGAATATAGTAAAACTTCTGGGTTATTGTATTCATGGTGAATCAAGGTTTCTTGTCTATGAAATGATGGGGAATGGGTCCTTGGAAACTCAATTGCATGGTCCTAATCATGGATCATCTTTAAATTGGCATCTTCGGTTAAGAATTGCTGTTGATGTTGCTAGAGCATTAGAGTATCTCCACGAGCACTGCAATCCTCCGGTGGTTCACAGAGACATAAAATCTTCCAACGTTCTTCTGGATTCTAACTTTAATGCCAAGCTTTCTGATTTTGGACTTGCTATAACTTCCGGAATGCAAGACAAGAATATAAAGATGTCTGGAACTTTGGGTTATGTGCCACCAGAGTACATATCACATGGCAAACTAACGGATAAGAGTGATGTGTATGCTTTTGGAGTTGTCCTTTTGGAGCTTCTAACAGGAAGAAAATCCATTGAAAAGATGCTCTCAGACCAATACCAGTCTCTTGTCACATGGGCCATGCCTCAGCTAACTGATAGATCAAAGCTTCCAAGTATTCTGGATCCTGAGATCAGAGACACAATGGATTTGAAGCATTTATATCAGGTTGCTGCAGTAGCTGTACTCTGTGTACAACCAGAACCAAGTTATAGGCCACTCATAACAGACGTTCTGCACTCACTCATCCCTTTGGTACCTGTTGAGCTTGGAGGATCGCTCAGACTTACAGAATCTGTCTTTGCTGAGAACTCTAATTG 1325 0.3909 MNLHVLFLPIVLFSAFLYAAPEPAMPSISASLHGPQRESIFQFSAEAEAESPGMSETPIVHHQNLNKRILIALIVCSTLLGGIFLFLSYVWINRHKYLKRSSRKSQENMEAANGVSINTVNVKFNYSRMADKKSSVAIFDFQLLEAATDSFSKNNIVGESGSRLVYRACFDEHFQAAVKKGDSDADREFENEVNWLSKIRHQNIVKLLGYCIHGESRFLVYEMMGNGSLETQLHGPNHGSSLNWHLRLRIAVDVARALEYLHEHCNPPVVHRDIKSSNVLLDSNFNAKLSDFGLAITSGMQDKNIKMSGTLGYVPPEYISHGKLTDKSDVYAFGVVLLELLTGRKSIEKMLSDQYQSLVTWAMPQLTDRSKLPSILDPEIRDTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPVELGGSLRLTESVFAENSN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02553 441 SMART serkin_6 151 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02553 441 Pfam Protein tyrosine and serine/threonine kinase 172 384 IPR001245 GO:0004672|GO:0006468
Bva02g02553 441 ProSiteProfiles Protein kinase domain profile. 151 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02553 441 Gene3D Phosphorylase Kinase; domain 1 100 223 - -
Bva02g02553 441 Gene3D Transferase(Phosphotransferase) domain 1 224 422 - -
Bva02g02553 441 PANTHER OS01G0750732 PROTEIN 3 438 - -
Bva02g02553 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Bva02g02553 441 PANTHER BNAC02G46490D PROTEIN 3 438 - -
Bva02g02553 441 SUPERFAMILY Protein kinase-like (PK-like) 130 417 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02553 Bva-Chr2 24024279 24027842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02553 7 363 Receptor kinase-like Gene Family AT1G80640 46.006 2.61e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Bva02g02553 PK_Tyr_Ser-Thr 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02553 - - gmx:100811188 668.692