Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02549 ATGCTTCATTTTCGTTGTTCCCATGCACCAGAAATGTTGAAACCTCTCACTCAAACGGTGCCGTTTTATGGGCGAACCCACTTCCCATTCCTCCCATCACCACCTTCAGACCACCCTCAGTTCCTCTCCCAATTCTCTCTCCCTGTCTCGGAACCTCCAGGTCTTCTTCCATTTGATGCGGACAGGAAAGAAACGGAAACAACGGCAACGCCTCCTACTCTTGATGGAATCGCTGCTGTTGTCGGCCAACACATCCTCTTTGGAGGCAAAGATACGACCTCCGACGTTGGCCACAACAAACCAACATTAACGACTTCACCCGGTTTCGTTTCGGTTTCGGGTGCCGAAACGCCAAGGAAAGACCTTTCTGTCACTAAGAGCTACAGAGGAGTGAGGAAGAGGCCATGGGGGAGGTGGTCGGCAGAGATACGCGACAGAATCGGTCGGTGCCGGCACTGGCTCGGAACATTCGACACTGCAGAGGAGGCGGCGCGGGCGTATGACGCAGCAGCAAGGCGTTTGAGGGGCTCTAAAGCAAGGACTAACTTTGAGATACCATCAGTGCTGCCAGTCtcatctccttcttcttcttcatcttcagatGGGAAAAAGAAGACTGTTAAGCCAAAAGCTGCACGTAACAATAGCAAGTGTTCTGTGGTTACTTCTGTTGCACAATTGTTCAGTGTGGCTCCTCAAGTTGCCAGAGAATGTAATCACAATCATGATGAAAGCAGAAAAGGCAATGGGTTTGGGAATGTGGAACTTGATTTGAAGCTGGGTGTGGATATTAATTGGTA 800 0.4863 MLHFRCSHAPEMLKPLTQTVPFYGRTHFPFLPSPPSDHPQFLSQFSLPVSEPPGLLPFDADRKETETTATPPTLDGIAAVVGQHILFGGKDTTSDVGHNKPTLTTSPGFVSVSGAETPRKDLSVTKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEIPSVLPVSSPSSSSSSDGKKKTVKPKAARNNSKCSVVTSVAQLFSVAPQVARECNHNHDESRKGNGFGNVELDLKLGVDINW 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02549 266 MobiDBLite consensus disorder prediction 187 202 - -
Bva02g02549 266 PRINTS Ethylene responsive element binding protein signature 128 139 IPR001471 GO:0003700|GO:0006355
Bva02g02549 266 PRINTS Ethylene responsive element binding protein signature 150 166 IPR001471 GO:0003700|GO:0006355
Bva02g02549 266 SUPERFAMILY DNA-binding domain 127 184 IPR016177 GO:0003677
Bva02g02549 266 MobiDBLite consensus disorder prediction 92 114 - -
Bva02g02549 266 Pfam AP2 domain 127 176 IPR001471 GO:0003700|GO:0006355
Bva02g02549 266 ProSiteProfiles AP2/ERF domain profile. 127 184 IPR001471 GO:0003700|GO:0006355
Bva02g02549 266 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084 65 252 - -
Bva02g02549 266 CDD AP2 126 185 IPR001471 GO:0003700|GO:0006355
Bva02g02549 266 Gene3D AP2/ERF domain 126 185 IPR036955 GO:0003700|GO:0006355
Bva02g02549 266 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 65 252 - -
Bva02g02549 266 MobiDBLite consensus disorder prediction 187 215 - -
Bva02g02549 266 MobiDBLite consensus disorder prediction 95 112 - -
Bva02g02549 266 SMART rav1_2 127 190 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02549 Bva-Chr2 24004529 24005329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02549 75 255 AP2-EREBP Transcription Factor Family AT1G80580 50.549 5.35e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva02g02549 AP2 2.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02549 - - zju:107408884 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02549 02 24004529 24005329 Bva02g02549 02 24004529 24005329 ECH