Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02525 ATGGATGAAGTTTCCCTCAACAGTGAACCAGTGGCAGATGATGATGCTGATGAATTTGAGATTGAAGGGGATTGTGGAATGACAGAATTTGTTGGTCAAACAGGGATAATTCAAGGAGAGAACCCTCTTCCTCCTGCTGTTGGAATGGAATTTGAGACTTACGAAGATGTATATTATTTCTACAACTGCTATGCCAAGGAACAGGGATTTGGTGTTAGAGTAAGTAATACATGGTATAGAAAGAGTAAGGAACGATACAGAGGAAAACTTAGCTGCAGTAGTGCAGGGTTCAAGAAAAAGAGTGAAGCAAATCACCCAAGACCTGAAACCAGAACTGGTTGTCCAGCAATGATTAAATTCAGGTTGATGGATTCCAAAAGGTGGAGAATTATAGAAGTTGAGCTTGAGCACAATCACTTAATTAACCCAAGCAGTGGAAAGTTTTATAAATCTCATAAGCACATGGGTGTTGGAACCAAGAGAACATTGCAATTAGAGGGCACAGAAGACATTCAGAAAATCAGGCTGTTTCGAACCGTGATAGTTGATGCTGAGGCTAATGGCAGTGTAGATGTTGACGAAGgagaattgaaaaatgatGCAATGTACTCCAATCAATTGAAGCTCAAGAAGGGTGATGGTGAAgcaattctgaatttttttagtCGCTGGCAATTAACGGACCcagatttcttttatgtgTTGGATATCAATGAAAACCAATGTTTGAGGAATATGTTTTGGGCCGATGCAAGGTGCAGAGTAGCATACAGTTATTTCAGTGATGTGGTCGTTATTGATACTACATGTTTGACAAGTGAATATGAAGTTCCTCTGGTTCTGTTTGTTGGAGTGAATCACCATGGACAGTCCATTCTGTTTGGTTGTGGATTGCTTGCTGGTGACACCACTGAATCATATACGTGGCTGTTTAGGGCATGGCTTACCTGTATCTTAGGACGCCCTCCACAAACTATTATTACTGATCATTCTGGAATCTTGCAAACTGCAATTGCTGATGTTTTTCCAAGAGCTTCGCACTGTCTTTGCTTATCCAATATCATGGGAAAGATTCCAGGAAAACTGGGAGGATTGCTAGAATATGAAGCGATTAAAGTAGCCTTGAATAGAGCAGTTTATTGCTCTCTGAGGCCTGAGGAATTCGAAGCAGCTTGGGAGGAGGTGATGCAGCAATGTGGTATTAGAGGCCATGAATGGCTTCAAGCAATATATGAGATTAGAAAACGATGGGTCCCGGCTTATTTAAAGGAAACTTTCTTGGCGGGAATGTTTCCAGTCCAACCAAGTGATGTCATACCATTGTTTTTTGAAGGCTATCTTGATAAACAAACTAGTCTAACTGAATTTCTGGAAAAATATGATCAAGCTTTGCAGACAAAGCGGGAACTTGAGGCTTTGGCAGATATGGATTCAAAAAATTCCTCCTTGATGCCAAAGACAAGTTGTTCCTTTGAGTCGCAGGTTTCCAAGTTATATACGCATGAAATATTGAGAATGTTTGAAAGGGAAGTAGAAGGAATGTTGTCTTGTTTTTGCAGCAGACAGATAAATGCGGATGGACCAGTTGCAACATACATGGTTAAAGAACAAGTCCAAGTTGAAGGAAATCAAAGAGACAGGAGAGATTATGAGGTGTATTTCAATGGATCCGAACTGGATGTCTTTTGCATTTGCGGTTTATTCAACTTGAGAGGTTACTTGTGTAAACATGCACTATATATATTGGGCCAAAATGGCATAGAAGAGATACCACCTCAGTACATTCTTTCGCGATGGAGAAAAGATGTGAAGCGCACTTATGTTATTGATCACAGTTCCAGTAGCATTGATATTAATAACCCAGTTCATAGATATGACCATTTATTCAAACGCATTGTCCAGGCCGTGGAGGAAGGTAGAAAATCTCATGACCGTTACAGGACCGCCGTACAGGCATTGGATGATATATTCAATAAACTCCATCTCGTAAATCTTAAGGATCATCCATTATA 2012 0.3941 MDEVSLNSEPVADDDADEFEIEGDCGMTEFVGQTGIIQGENPLPPAVGMEFETYEDVYYFYNCYAKEQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEANHPRPETRTGCPAMIKFRLMDSKRWRIIEVELEHNHLINPSSGKFYKSHKHMGVGTKRTLQLEGTEDIQKIRLFRTVIVDAEANGSVDVDEGELKNDAMYSNQLKLKKGDGEAILNFFSRWQLTDPDFFYVLDINENQCLRNMFWADARCRVAYSYFSDVVVIDTTCLTSEYEVPLVLFVGVNHHGQSILFGCGLLAGDTTESYTWLFRAWLTCILGRPPQTIITDHSGILQTAIADVFPRASHCLCLSNIMGKIPGKLGGLLEYEAIKVALNRAVYCSLRPEEFEAAWEEVMQQCGIRGHEWLQAIYEIRKRWVPAYLKETFLAGMFPVQPSDVIPLFFEGYLDKQTSLTEFLEKYDQALQTKRELEALADMDSKNSSLMPKTSCSFESQVSKLYTHEILRMFEREVEGMLSCFCSRQINADGPVATYMVKEQVQVEGNQRDRRDYEVYFNGSELDVFCICGLFNLRGYLCKHALYILGQNGIEEIPPQYILSRWRKDVKRTYVIDHSSSSIDINNPVHRYDHLFKRIVQAVEEGRKSHDRYRTAVQALDDIFNKLHLVNLKDHPL 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02525 670 Coils Coil 453 473 - -
Bva02g02525 670 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Bva02g02525 670 Pfam FAR1 DNA-binding domain 60 142 IPR004330 -
Bva02g02525 670 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 664 IPR031052 GO:0006355
Bva02g02525 670 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 31 664 - -
Bva02g02525 670 SMART 26again6 561 588 IPR006564 GO:0008270
Bva02g02525 670 Pfam MULE transposase domain 263 355 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02525 Bva-Chr2 23888814 23892641 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva02g02525 MULE 2e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02525 - K17604 qsu:111991932 1058.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02525 02 23888814 23892641 Bva02g02525 02 23888814 23892641 ECH