Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02518 ATGGCCATAACCCACTCACCTCTCCCTTCTCTGCTCCCACCCTCTACTTCTACTActacttcttcttcctctaccTACTTCTGTGGTGTGATCCATCTCCGCACCCATAAGAACTTCATTTCTGTTAACTCCTCTCCTTTTCCTTCATCGACGTTAAGTACAAAGACCTCTCCAAGACGCTTTGGAACCGTGTTTGCTGCTTCCGGTGACTATTATGCTACTCTTGGAGTTCCCAAATCTGCCACaggcaaagaaataaaagcgGCTTATCGAAGGTTAGCTCGTCAGTACCATCCTGATGTGAACAAGGAGCCTTGGGCAACTGAAAAGTTCAAAGAGATTAGTAATGCATATGAGGTGCTATCAGATGATAAAAAGAGGGCATTGTATGATCAATATGGAGAGTCTGGAGTTAAGAGTACTGTGGGAGGAGCATCAAGTGCTTATACGACTAatccatttgatttatttgagaCATTCTTTGGGCCAAGTATGGGTGGCTTTGCTGGAATGGATCCAACTGGATTTGGAACACGACGCCGTAGTACTGTTACTAAGGGTGAAGACATTCGCTATGATATCTCCTTAGAATTTTCTGAGGCCATTTTTGGAGCAGAGAAAGAATTTGAGCTTTCCCATTTAGAAACATGTGAAGCCTGTACTGGTACTGGAGCAAAGATAGGGTCCAAGATGAGAATATGTTCAACATGTGGTGGGAGGGGTCAGGTGATGAGGACAGAACAAACACCTTTTGGAATGTTCTCGCAGGTTTCAGTATGCCCAAACTGTGGAGGGGATGGTGAAATCATATCTGAATATTGTAGGAAATGCAGTGGTGAAGGACGTATCCGggtgaagaaaaatatcaaagtgAAAGTTCCTCCAGGGATTAGTTCAGGCAGCATTCTTAGAGTTTCTGGGGAGGGTGATGCTGGACCAAGAGGGGGCTCTCCAGGAGATCTCTATGTATATCTTGATGTGGAAGAGATACCGGGAATTCAGAGAGATGGCATTAATCTCAACTCTACAATAACAATAAGCTATCTAGATGCCATATTAGGTTCTGTTGTTAAGGTAAAGACAGTTGAAGGCATTTCTGAACTACAGATACCTCCTGGGACCCAACCTGGAGATGTTCTTGTGCTTACAAAGAAAGGTGCACCAAAATTGAACAAACCGTCAATACGTGGTGACCACTTATTTACAGTTAAAGTTACAATACCAAAACGTGTCAGTACAAAGGAAATTGAGTTGCTTGAAGAACTTTCTTCCCTAAGCAGCAACAAAAGCGGCCGCTCAAAATCCCGTCATAGAACTCCCTCTCCCCCAGGAAGTTCTGAAGGTCTTGCAACTCCGAGTGCTGAAAGTCCAACAGCAACAGCTGCTGAAAAATCTGAAGAATCAGAAGGCCAAAATGACGCATGGAAGCAGTTAAAGGATTTTGCAGGGTGTGTGGCAAATGGAGCTCTAAAGTGGCTAAAAGATAACCTCTA 1493 0.4186 MAITHSPLPSLLPPSTSTTTSSSSTYFCGVIHLRTHKNFISVNSSPFPSSTLSTKTSPRRFGTVFAASGDYYATLGVPKSATGKEIKAAYRRLARQYHPDVNKEPWATEKFKEISNAYEVLSDDKKRALYDQYGESGVKSTVGGASSAYTTNPFDLFETFFGPSMGGFAGMDPTGFGTRRRSTVTKGEDIRYDISLEFSEAIFGAEKEFELSHLETCEACTGTGAKIGSKMRICSTCGGRGQVMRTEQTPFGMFSQVSVCPNCGGDGEIISEYCRKCSGEGRIRVKKNIKVKVPPGISSGSILRVSGEGDAGPRGGSPGDLYVYLDVEEIPGIQRDGINLNSTITISYLDAILGSVVKVKTVEGISELQIPPGTQPGDVLVLTKKGAPKLNKPSIRGDHLFTVKVTIPKRVSTKEIELLEELSSLSSNKSGRSKSRHRTPSPPGSSEGLATPSAESPTATAAEKSEESEGQNDAWKQLKDFAGCVANGALKWLKDNL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02518 497 SUPERFAMILY Chaperone J-domain 67 176 IPR036869 -
Bva02g02518 497 Pfam DnaJ C terminal domain 190 408 IPR002939 -
Bva02g02518 497 SUPERFAMILY HSP40/DnaJ peptide-binding domain 185 337 IPR008971 GO:0006457|GO:0051082
Bva02g02518 497 CDD DnaJ_zf 217 281 IPR001305 GO:0031072|GO:0051082
Bva02g02518 497 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 204 284 IPR036410 -
Bva02g02518 497 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Bva02g02518 497 MobiDBLite consensus disorder prediction 437 465 - -
Bva02g02518 497 CDD DnaJ_C 188 410 - -
Bva02g02518 497 SMART dnaj_3 69 126 IPR001623 -
Bva02g02518 497 MobiDBLite consensus disorder prediction 1 21 - -
Bva02g02518 497 Gene3D - 187 323 - -
Bva02g02518 497 Pfam DnaJ central domain 217 281 IPR001305 GO:0031072|GO:0051082
Bva02g02518 497 Gene3D DnaJ domain 67 172 IPR036869 -
Bva02g02518 497 PRINTS DnaJ domain signature 126 145 IPR001623 -
Bva02g02518 497 PRINTS DnaJ domain signature 72 90 IPR001623 -
Bva02g02518 497 PRINTS DnaJ domain signature 106 126 IPR001623 -
Bva02g02518 497 PRINTS DnaJ domain signature 90 105 IPR001623 -
Bva02g02518 497 ProSiteProfiles dnaJ domain profile. 70 134 IPR001623 -
Bva02g02518 497 TIGRFAM DnaJ_bact: chaperone protein DnaJ 70 424 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bva02g02518 497 SUPERFAMILY HSP40/DnaJ peptide-binding domain 334 419 IPR008971 GO:0006457|GO:0051082
Bva02g02518 497 Pfam DnaJ domain 70 131 IPR001623 -
Bva02g02518 497 Gene3D - 217 281 - -
Bva02g02518 497 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 61 440 - -
Bva02g02518 497 CDD DnaJ 70 123 IPR001623 -
Bva02g02518 497 PANTHER MOLECULAR CHAPERONE HSP40/DNAJ FAMILY PROTEIN 61 440 - -
Bva02g02518 497 Hamap Chaperone protein DnaJ [dnaJ]. 67 481 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bva02g02518 497 ProSiteProfiles Zinc finger CR-type profile. 204 286 IPR001305 GO:0031072|GO:0051082
Bva02g02518 497 Gene3D - 333 425 - -
Bva02g02518 497 MobiDBLite consensus disorder prediction 425 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02518 Bva-Chr2 23863831 23870180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02518 71 177 C2H2 Transcription Factor Family AT1G74250 37.719 6.99e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02518 K03686 - gmx:100798567 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02518 02 23863831 23870180 Bva02g02518 02 23863831 23870180 ECH