Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02514 ATGGCTTTTAGCGGAATCTTTTGTTGTGGAAAGGGTTCGGATCGCAAAGCACGAGTAAAGAAACAACCTACGTGGCGGGTCTTCTCACTGAAGGAACTGCACTCAGCTACGAATAATTTCAACTATGATAACAAGCTTGGAGAAGGGGGATTTGGCAGCGTATACTGGGGTCAGCTTTGGGACGGATCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCGACAAAGCAGAGATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTACGACACAAGAATCTTCTTAGTCTACGTGGGTATTGTGTCGAAGGACAGGAGCGGTTAATTGTATATGACTATATGCCAAATTTGAGCCTTCTCTCTCATCTCCATGGACAGCACTCAGCAGAATGCCTTCTTGATTGGAATCGACGAATGAATATTGCAATTGGGTCTGCTGAGGGAATTGCatatctcCACCATCAAGCAACACCGCACATCATTCATAGAGATATCAAAGCAAACAATGTATTACTGAATTCAGATTTCCAGGCGCAGGTTGCTGATTTTGGATTTGCTAAGTTGATCCCTGATGGGGCCACCCATGTGACTACAAGAGTTAAGGGTACCCTTGGCTACCTTGCACCAGAATATGCTATGTTAGGTAAAGCCTCCGAAAGTTGTGATGTTTACAGTTTTGGAATTCTCTTGCTAGAGCTTGTTAGTGGTAGGAAACCAATTGAAAAACTAAGTGCCACAATGAAACGATCAATAACTGACTGGGCACTACCATTGGCTGGTGAGAAGAAATTTAGTGAACTTGCAGATCCAAGACTAAACGGCAATTATGTGGAGGAAGAACTTAAAAGAGTTATTCTTGTTGCACTTGTGTGTGCTCGCAGTCAGCCTGAGAAGAGACCCACCATGCTCGAGGTGGTAGAGCTACTCAAAGAAGAATCTAAAGATAAGTTTTCTCAGTTAGAAAACGACGAACTGTTTAAGATCCCTCAGGCTGTAGACCACAATGACGGGACATCAGCTGCTGAAGACAGTTCAGACTTCATCACTGAAGAGAAGGAATCAAAACACGAGTTGAAAGAGAATTCTGCGCTATG 1100 0.43 MAFSGIFCCGKGSDRKARVKKQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSDKAEMEFAVEVEILARVRHKNLLSLRGYCVEGQERLIVYDYMPNLSLLSHLHGQHSAECLLDWNRRMNIAIGSAEGIAYLHHQATPHIIHRDIKANNVLLNSDFQAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELVSGRKPIEKLSATMKRSITDWALPLAGEKKFSELADPRLNGNYVEEELKRVILVALVCARSQPEKRPTMLEVVELLKEESKDKFSQLENDELFKIPQAVDHNDGTSAAEDSSDFITEEKESKHELKENSAL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02514 366 Gene3D Phosphorylase Kinase; domain 1 10 115 - -
Bva02g02514 366 PANTHER BNAA05G14800D PROTEIN 1 363 - -
Bva02g02514 366 ProSiteProfiles Protein kinase domain profile. 40 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02514 366 MobiDBLite consensus disorder prediction 347 366 - -
Bva02g02514 366 PANTHER OS01G0750732 PROTEIN 1 363 - -
Bva02g02514 366 Pfam Protein tyrosine and serine/threonine kinase 42 311 IPR001245 GO:0004672|GO:0006468
Bva02g02514 366 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Bva02g02514 366 PIRSF ILK 9 329 - -
Bva02g02514 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Bva02g02514 366 Coils Coil 305 325 - -
Bva02g02514 366 MobiDBLite consensus disorder prediction 330 366 - -
Bva02g02514 366 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02514 366 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Bva02g02514 366 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Bva02g02514 366 CDD STKc_IRAK 46 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02514 Bva-Chr2 23842358 23845924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02514 28 314 Trihelix Transcription Factor Family AT1G70460 51.546 1.16e-97 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Bva02g02514 Pkinase 5.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02514 - - rcu:8282354 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02319 08 15001525 15004801 Bva02g02514 02 23842358 23845924 BWGD
Bva02g02514 02 23842358 23845924 Bva02g02514 02 23842358 23845924 ECH