Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02478 ATGTCAGAGACAGAGAGCAGCAGCGTCGGGTGTTGTGCTGTAGATCATAATCGAAGGCCACACAGCGCAAGCCAACCTGGTTGGAGAGCAATAGAACACCTTTTGTTACAACATGGTGAAGTAGGACTTGAACATTTCCACCTTTTATGCAAACTAGGCAGCGGAGACATTGGGAAGGTTTTCCTGTGTGAgatcaagaacaagaacaataaCCCCTTCAAGACACAGTTGGTGCCTAAGCGTTATTACGCCATGAAAGTGGTTGACAATGAATCTCTGAGAGAGAAGAATAAGCTGAAAAGGGCAGAAACGGAGAAGCAAGTATTGAGCATGCTGGACCATCCTTTCTTACCAACTCTTTATGCCAAGTTCGATGCTCATCAACACTCATGCTTGATCATGGATTACTGCCATGGCGGTGACTTGTTTAAACTTCAACAACGCCAGTCAGGTTTTCATTTTAGCATCTCAACTGCAAAATTCTATGCAGCCGAGGTGCTATTAGCCCTTGAGTATCTCCACATGAAGGGGATAATTTATAGGGACCTAAAGCCAGAAAATGTGCTTATTCAGGAAGATGGTCATATTATGCTCTCAGACTTTGATCTCTCACTTCACTGTGAGGTTCATCCAAAGCTTGTTGAATCTCTAGTTACAAGCAAGAGACTTAAGAAGCCAACCTTGTGCTGTGAAGAACCAAAGGAGcatatgaaaaggaaaaataaaaaaatgggtgCTGTTGCAGAAGGAATGTTATCAGCAAGAGGTGCACAGAAGGTCAACATTGAAATGTCAGCAGAACCCATTACTGCTAGGTCAGAGTCTTTTGTGGGGACCCATGAGTATTTGGCACCAGAGATTATTTTAGGATTTGGCCATGGAAGTGCAGTGGATTGGTGGGCATTTGGTGTGTTTCTTTATGAACTATTATATGGGTTTACACCTTTCAGAGATAAGAACAATAAAGAAACACTGAAGAATATCATAGAGCAGTCATTGAGCTTCCCAAGAACTCAATTCAAAGACAGAAAAGACTCTGAAGAGATCAGAGAAGCACAAGATCTAATAAGGAAGCTGTTGGTGAGAAATCCAGAGAAGAGACTAGGATACACAAGAGGTTCTTGTGAGATAAAGAAGCACGAGTTCTTTGAGGGGGTGAACTGGGCATTAATCAGATCAGTTAAGCCTCCTATTGTCCCTAGAGATTTGGATCAGGACACAAACAAGATCCCATTTTCCTCGAGGAAACAAATTGTAAAGAAGAAAGCTACATTTGAGGCCCCTCAACAAATTGACtactttta 1304 0.408 MSETESSSVGCCAVDHNRRPHSASQPGWRAIEHLLLQHGEVGLEHFHLLCKLGSGDIGKVFLCEIKNKNNNPFKTQLVPKRYYAMKVVDNESLREKNKLKRAETEKQVLSMLDHPFLPTLYAKFDAHQHSCLIMDYCHGGDLFKLQQRQSGFHFSISTAKFYAAEVLLALEYLHMKGIIYRDLKPENVLIQEDGHIMLSDFDLSLHCEVHPKLVESLVTSKRLKKPTLCCEEPKEHMKRKNKKMGAVAEGMLSARGAQKVNIEMSAEPITARSESFVGTHEYLAPEIILGFGHGSAVDWWAFGVFLYELLYGFTPFRDKNNKETLKNIIEQSLSFPRTQFKDRKDSEEIREAQDLIRKLLVRNPEKRLGYTRGSCEIKKHEFFEGVNWALIRSVKPPIVPRDLDQDTNKIPFSSRKQIVKKKATFEAPQQIDYF 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02478 434 Coils Coil 85 105 - -
Bva02g02478 434 Pfam Protein kinase domain 47 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02478 434 Pfam Protein kinase domain 273 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02478 434 PANTHER PROTEIN KINASE PINOID 2 7 434 - -
Bva02g02478 434 SMART serkin_6 46 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02478 434 Gene3D Phosphorylase Kinase; domain 1 44 136 - -
Bva02g02478 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Bva02g02478 434 Gene3D Transferase(Phosphotransferase) domain 1 268 401 - -
Bva02g02478 434 CDD STKc_phototropin_like 45 404 - -
Bva02g02478 434 SUPERFAMILY Protein kinase-like (PK-like) 24 402 IPR011009 -
Bva02g02478 434 PANTHER FLIPPASE KINASE 1-RELATED 7 434 - -
Bva02g02478 434 Gene3D Transferase(Phosphotransferase) domain 1 137 206 - -
Bva02g02478 434 ProSiteProfiles Protein kinase domain profile. 46 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02478 Bva-Chr2 23695430 23696850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02478 1 402 AGC Kinase Gene Family AT2G26700 46.436 1.39e-140 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva02g02478 Pkinase 1.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02478 K08286 - nnu:104592366 469.544