Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02451 ATGGGTGGGGCTTCTTTGGCGGGCTTGCAAGATCACCTCAAATTGGCGAGAGAGTACGCTCTCGAAGGGTTGTATGATACCTCTATCATCTTTTTCGATGGCGCAGTTGCTCAGATCAACAaGCACTTAAATAGTGTTGATGATCCCTTAATTCGTACAAAATGGATGAACGTTAAGAAATCACTTTCTGAGGAAACAGAAGTTGTAAAACAATTGGATGCAGAGAGAAGGGCATTTAAAGAAGCTCCTGTTGGCAGACGTCCTCCTTCTCCTCCAATATCTACTAAATCATCATTTGTTTTTCAGCCATTAGATGAGTATCCTACTTCATCAAGTGCTCCTATGGATGATCCTGATGTATGGAGGCCACCTAGTCGAGATAATACAAGTAGAAGACCCACAAGACCTGGTCAAGTGGGTGCCCGGAAGTCACCGCAAGATGGGACTTGGGCCCGAGGTTCTACAAGAACAGGTACAGCTGGTCGTGGTGCAAAGGCTGGTGCTACAAGCAGAGTTAACTCAGGGGTCCGAGCATCAACTACTGGAAAGAAAGGCACTGGTTCTGGAAAATCTAACAAGGCAGATTCAGTTAACGGTGATGCTGAAGATGGTAAGTCAAAGAAAGGACAATATGAGGGTCCTGATCCTGACTTGGCTGCAATGCTTGAAAGAGACGTGTTAGAAACCACTCCTGGAGTGAGATGGGATGATGTTGCAGGGTTGAATGAAGCCAAAAGACTTCTAGAAGAAGCCGTTGTGCTTCCTCTGTGGATGCCTGAATATTTCCAGGGCATCAGGAGACCCTGGAAAGGTGTTCTCATGTTTGGTCCTCCCGGAACTGGGAAGACACTGCTAGCCAAAGCAGTTGCTACTGAATGTGGGACCACTTTCTTCAATGTTTCTTCTGCTACTTTAGCTTCTAAATGGCGTGGAGAAAGTGAGCGCATGGTTAGATGTTTGTTTGACCTTGCACGAGCATATGCGCCAAGTACAATTTTCATCGATGAGATTGATTCCCTATGCAATGCTCGGGGGGCATCCGGGGAGCACGAATCATCCAGAAGGGTGAAGTCTGAACTTCTTGTTCAGGTTGATGGTGTAAACAATACTGGTACAAATGAAGATGGTAGCCGTAAAATAGTAATGGTTTTGGCAGCAACGAACTTCCCATGGGATATAGATGAGGCTCTCAGGAGAAGATTGGAAAAGCGTATATACATTCCTCTTCCAAACTTTGAGAGCCGTAAAGAGCTGATCCGGATAAATTTGAAGACTGTAGAGGTGGCTCCTGATGTAAATATAGATGAAGTGGCTCGTCGGACAGAGGGCTATAGTGGGGATGATCTGACAAATGTATGTCGAGACGCTTCCTTGAATGGCATGCGGCGTAAGATAGCAGGAAAGACTCGCGATGAGATCAAGAACATGTCCAAGGATGAGATTTCCAAGGATCCCGTTGCCATGTGTGACTTTGAAGAAGCTTTGGCAAAGGTCCAACGAAGTGTTTCTCAGGCTGATATTGAACGTCATGAGAAGTGGTTTACTGAATTTGGATCAGCATA 1562 0.4565 MGGASLAGLQDHLKLAREYALEGLYDTSIIFFDGAVAQINKHLNSVDDPLIRTKWMNVKKSLSEETEVVKQLDAERRAFKEAPVGRRPPSPPISTKSSFVFQPLDEYPTSSSAPMDDPDVWRPPSRDNTSRRPTRPGQVGARKSPQDGTWARGSTRTGTAGRGAKAGATSRVNSGVRASTTGKKGTGSGKSNKADSVNGDAEDGKSKKGQYEGPDPDLAAMLERDVLETTPGVRWDDVAGLNEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVNNTGTNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDEISKDPVAMCDFEEALAKVQRSVSQADIERHEKWFTEFGSA 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02451 520 Gene3D - 3 80 - -
Bva02g02451 520 Gene3D - 410 496 - -
Bva02g02451 520 CDD AAA 266 409 - -
Bva02g02451 520 Pfam Vps4 C terminal oligomerisation domain 473 518 IPR015415 -
Bva02g02451 520 MobiDBLite consensus disorder prediction 91 109 - -
Bva02g02451 520 MobiDBLite consensus disorder prediction 196 216 - -
Bva02g02451 520 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 7 520 IPR028596 GO:0008017|GO:0008568|GO:0051013
Bva02g02451 520 ProSitePatterns AAA-protein family signature. 381 400 IPR003960 GO:0005524|GO:0016887
Bva02g02451 520 SMART AAA_5 268 411 IPR003593 -
Bva02g02451 520 Pfam AAA+ lid domain 431 472 IPR041569 -
Bva02g02451 520 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 4 520 - -
Bva02g02451 520 PANTHER AAA DOMAIN-CONTAINING 4 520 - -
Bva02g02451 520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 506 IPR027417 -
Bva02g02451 520 MobiDBLite consensus disorder prediction 79 216 - -
Bva02g02451 520 Pfam ATPase family associated with various cellular activities (AAA) 272 409 IPR003959 GO:0005524|GO:0016887
Bva02g02451 520 Gene3D - 230 511 IPR027417 -
Bva02g02451 520 MobiDBLite consensus disorder prediction 172 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02451 Bva-Chr2 23557804 23561505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02451 224 512 Calmodulin-binding Proteins AT3G56690 40.268 3.26e-52 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02451 K07767 - tcc:18595849 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02451 02 23557804 23561505 Bva02g02451 02 23557804 23561505 ECH