Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02448 GATTTACGCGTCCTGAGTCAATATTGTTTTCTCTGCCCTTCTGAATCTTGTagacatgaagaaagaaaacattgtcACTTCAAAAGCTGTAGAGCTCCCTGGTCGATTGACACGTTCTCGAGCTGCTGCCTTTTGTGCTTCTGGACAGCTGCTCCCTCTGCAggaaaaaacacaaataaatcaaaagcaGCCTCTGCGAGCCAATCCAAAGAGAGCAGCTTCTGATAATGCATGTTTTCAGCGTAAAAAGAGGGTTGTTCTTCAGGATACCACCAATATTTGCTGTGACAATTCATATAAGAATTGTTTCAATGCAACTAAGGTTCAgGCCAAGAAAAGCAAGCCGGTTAAACGTGGTCAAGTCCGTGATGATAAAGTTGTTCCTTCAGTTGCTGCACTTCCTCGGTTGAGTGCTAGTGTAGTGTGTAGCACAGATAATAGTCTGCTTGAAAGTCAGAAGTCTCAAATATCTGTTCAGCATCTAATATGCCAAAAGAAAGTCAAGAAAAGTTTCCTTCCTGAACTTCTGAGTGCAAAGAATCCAGACATTCCTGATATAGATGCTGATCGTGAGGATCCTCTATTATGCAGTCTCTATGCTGCTGACATCTACCACAATTTACGTATTGCTGAGCTTGCAAGAAGGCCGCATCCTAACTTCATGGAAACAGTGCAGAGAGATATTACTCCAAGCATGCGCGCAATACTGGTTGATTGGCTTATAGAGGTTTCTGAGGAATATAAATTGGGATCAGACACGCTTTATCTTACTATTTACCTTATTGATTGGTTTCTCTCCAAAAATTACATTGAAAGACAAGGACTTCAGTTGCTGGGCATCACCTGCATGCTAATTGCCTCGAAATACGAAGAAATTTGTGCTCCACGTGTCGAAGAATTCTGTTTCATTACTGACAACACGTACACAAAAGAGGAGGTAATAAAAATGGAGACTCAAGTTTTGAAGTGCTCCGAGTTTCAATTGTTTGCTCCCACTACAAAAGCTTTCCTCAGGAGGTTTATTCGGGCAGCACAAGCTTCTTACAAGAGTCCTAGCCTTGAATTGGAGTATCTTGCCAATTACTTAGCTGAACTAACACTAATGGATTATGGTTTCTTGAATTTCCCACCTTCCATTGTTGCTGCATCAGCTATATTTCTTGCTAGATGGACATTGGATCAGTCAAATAACCCATGGAATTCAACTCTTGAACACTATGCCTGTTACAAGGCATCAAATCTGAAAACTGCAGTTCTTGCATTACAAGATCTACATTTGAATTCCAATGGCTGCCCTCTGCGTGCCATTTGCAACAAGTACAAGCAAGACAAGTTTAAATGTGTAGCGGCTTTGTCTTCACCAAAGCTGCCTGAAACTTTGTTTTG 1386 0.4004 MKKENIVTSKAVELPGRLTRSRAAAFCASGQLLPLQEKTQINQKQPLRANPKRAASDNACFQRKKRVVLQDTTNICCDNSYKNCFNATKVQAKKSKPVKRGQVRDDKVVPSVAALPRLSASVVCSTDNSLLESQKSQISVQHLICQKKVKKSFLPELLSAKNPDIPDIDADREDPLLCSLYAADIYHNLRIAELARRPHPNFMETVQRDITPSMRAILVDWLIEVSEEYKLGSDTLYLTIYLIDWFLSKNYIERQGLQLLGITCMLIASKYEEICAPRVEEFCFITDNTYTKEEVIKMETQVLKCSEFQLFAPTTKAFLRRFIRAAQASYKSPSLELEYLANYLAELTLMDYGFLNFPPSIVAASAIFLARWTLDQSNNPWNSTLEHYACYKASNLKTAVLALQDLHLNSNGCPLRAICNKYKQDKFKCVAALSSPKLPETLF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02448 443 SUPERFAMILY Cyclin-like 313 437 IPR036915 -
Bva02g02448 443 Pfam Cyclin, C-terminal domain 313 435 IPR004367 -
Bva02g02448 443 Gene3D - 198 311 - -
Bva02g02448 443 CDD CYCLIN 313 391 IPR013763 -
Bva02g02448 443 SUPERFAMILY Cyclin-like 173 310 IPR036915 -
Bva02g02448 443 SMART Cyclin_C_2 313 436 IPR004367 -
Bva02g02448 443 SMART cyclin_7 317 405 IPR013763 -
Bva02g02448 443 SMART cyclin_7 220 304 IPR013763 -
Bva02g02448 443 PIRSF Cyclin_A_B_D_E 5 442 IPR039361 -
Bva02g02448 443 PANTHER CYCLIN-A2-4 45 443 - -
Bva02g02448 443 Gene3D - 184 432 - -
Bva02g02448 443 Pfam Cyclin, N-terminal domain 184 309 IPR006671 -
Bva02g02448 443 CDD CYCLIN 214 303 IPR013763 -
Bva02g02448 443 PANTHER CYCLINS 45 443 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02448 Bva-Chr2 23544818 23549663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02448 1 443 Core Cell Cycle Gene Families AT1G80370 54.894 8.93e-169 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02448 K06627 - gmx:100793657 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02448 02 23544818 23549663 Bva02g02448 02 23544818 23549663 ECH