Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02446 ATGTCACTGGCGGAGTCCGAAGAAGTCATCGAAATGAACTACGAGGAGACTGAGCTCACCTTGGCCCTCCCTGGCGAGTCTCAGGCAGCCAAAACCCGCAATAAACGCGACTTCTCAGAGACCGTTGATCTTCGTCTAGGCCGCAGCAACAGCTGCAGTTGCATCAgtgaaaaatcagaaaataataCCTTCTGCTCCGCTAAATCCCCGGCACCGAAAGCACAGGTGGTGGGGTGGCCGCCGGTGAGATCAAGTAGGAAGAATGAGATGAAAAGCTGCAAGTACGTGAAGGTGGCTGTAGATGGAGCTCCATATCTGAGAAAAGTAGGTCTTGAAATGTACGAGAGTTATGAGGAGCTGCTGAGGGCTTTGGGGACCATGTTTTGTTGCTTGACCATTCGTAATCATTTGAACGAGAGGAAAATCATGGACCTTGGAAACGGAGTTGAATACGTGCCCACCTATGAAGACAAAGATGGTGACTGGATGTTGGTTGGCGATGTCCCATGGAACATGTTTGTTGAATCATGCAGAAGAATAAGGTTGATGATTAGCTCAGAAGCTATTGGCTTAgCTCCAAGGACACCTTCAAAGTGCACGAGCTCAACTTA 611 0.4763 MSLAESEEVIEMNYEETELTLALPGESQAAKTRNKRDFSETVDLRLGRSNSCSCISEKSENNTFCSAKSPAPKAQVVGWPPVRSSRKNEMKSCKYVKVAVDGAPYLRKVGLEMYESYEELLRALGTMFCCLTIRNHLNERKIMDLGNGVEYVPTYEDKDGDWMLVGDVPWNMFVESCRRIRLMISSEAIGLAPRTPSKCTSST 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02446 203 Gene3D - 87 197 - -
Bva02g02446 203 SUPERFAMILY CAD & PB1 domains 83 184 - -
Bva02g02446 203 PANTHER AUXIN-RESPONSIVE PROTEIN IAA15 5 189 - -
Bva02g02446 203 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 189 IPR003311 GO:0005634|GO:0006355
Bva02g02446 203 ProSiteProfiles PB1 domain profile. 93 187 IPR000270 GO:0005515
Bva02g02446 203 Pfam AUX/IAA family 27 194 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02446 Bva-Chr2 23537545 23538738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02446 49 188 B3 DNA Binding Superfamily AT3G61830 30.000 3.57e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva02g02446 AUX_IAA 1.4e-57 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02446 K14484 - ming:122065790 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02446 02 23537545 23538738 Bva02g02446 02 23537545 23538738 ECH