Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02445 ATGGCCAAAGAAGGTCTTGGACTTGAGATCACGGAACTAAGGTTGGGGTTGCCCGGCGGTGAACATAAGAATGAGAAGAAGAGGGCTTTTTCGGAGATCTCCGGCAGCGACGAAAACAGCTGCTCCGACGACCGGAAACTGCCGGCAAAGAATCAAGTAGTGGGGTGGCCTCCGGTGTGCTCGTACCGTAGGAAGAACAGCTTCAGCGAAGGGTCAAAAATGTACGTGAAGATTAGCATGGACGGGGCTCCTTTCTTGCGTAAAATTGATTTGGGCATGCACAAGGGATACTCGGAGCTAGCTTTGGCCTTGGAGAAGCTCTTTGGCTGCCATGGAATTGGCGAAGCGTTAAAGGATGCGGACAGATCTGAACACGTTCCCATCTACGAGGACAAAGATGGTGATTGGATGCTGGTTGGCGATGTCCCTTGGCAAATGTTCATTGAATCGTGCAAGAGGCTGAGGATTATGAAGAAATCGGATGCAAAGGTTTTTGGCTTGCAACCCAAAGGGACTCTAAAGCTATTCATAGAAGGCGTGACAAAGTA 548 0.4982 MAKEGLGLEITELRLGLPGGEHKNEKKRAFSEISGSDENSCSDDRKLPAKNQVVGWPPVCSYRRKNSFSEGSKMYVKISMDGAPFLRKIDLGMHKGYSELALALEKLFGCHGIGEALKDADRSEHVPIYEDKDGDWMLVGDVPWQMFIESCKRLRIMKKSDAKVFGLQPKGTLKLFIEGVTK 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02445 182 MobiDBLite consensus disorder prediction 17 46 - -
Bva02g02445 182 PANTHER AUXIN-RESPONSIVE PROTEIN 7 172 - -
Bva02g02445 182 SUPERFAMILY CAD & PB1 domains 67 158 - -
Bva02g02445 182 Gene3D - 68 169 - -
Bva02g02445 182 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 172 IPR003311 GO:0005634|GO:0006355
Bva02g02445 182 ProSiteProfiles PB1 domain profile. 73 161 IPR000270 GO:0005515
Bva02g02445 182 Pfam AUX/IAA family 39 163 IPR033389 -
Bva02g02445 182 MobiDBLite consensus disorder prediction 17 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02445 Bva-Chr2 23530892 23533242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02445 69 180 B3 DNA Binding Superfamily AT4G23980 33.929 1.33e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva02g02445 AUX_IAA 1.2e-44 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02445 K14484 - gmx:547784 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02445 02 23530892 23533242 Bva08g02266 08 14763988 14766546 BWGD
Bva02g02445 02 23530892 23533242 Bva02g02445 02 23530892 23533242 ECH