Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02429 ATGGATGACACTGACGATGATGCAAGGTATCCCCCTAACCCATATGGTTTTAATCACCATCAGGGTTATGGTTCTCTGAATCGTCAGAAACTTTCAGCTAGAGGTAGTCCATATTCTCATCCAGTTATGAATGAATATGCCGAagataataatgatgatgaggatgaagaagaagaagaagagtcAGAAGGGGGAGAAGATGGTCTTGATCAAAGTAACAGTATTCAGCACAAAGATGTAGATGACAATGATGCCGCTGCTGATGctgatggtggtggtggtggtgatgatgacgatgatgaagaagaagtgGAAGAGGGTGAGGATggggaagaaaatgatgatcATAACGATGGCCATGATAATGATAAGCAGAGGATGGAGGATGATTCAGAATGGAATCCTAAAAGGCGAAAGCTGAAGAGTTTAATTTCAACTTATGAATTTGCTCCTCGTGTACCACCACCATCAACTGTGGTTCCCTCAGTCTCAAAACCATCTTTTGGTGGGAGGAATTCCCTTACTGACTGGACAGAGCATGAGACGTTTGTACTTCTTGATGCTTGGGGTGACCGATTTCTTCAACATGGAAGGAAGAGTCTTCGGTCTGAGGAGTGGCAAGAAGTTGCTGAAAAGGTATCAGaagtttcaaaaattgaaagaaccGATACTCAGTGTAGGAATCGTCTAGAtacattgaagaaaaaatacaaaaaagagaagactAAATTAGCAGAAACGGGTGGTGGGAATAGCAAGtgggtttattttaaaaggatGGATAAGCTGATGTCTTCTCCACCTCAACAACCTGGTCTCTCTTGTGGTTTGGACTCAGGAGAGTATGTTTTTATGAACCCTAGGGTTTATTTGAACAGTGCTAATAGATTGGATGAGATGAAGGATAGTCCAGGGAATTCAGAATCTACTGGTGAAGAAGAAGGCTTAGATGGACCTCGgccaaagaaaagaaggcaCGGAAGGGACAACTATGAAGCTTCTTCCTTCAGATTGCTTGCAGATTCCATTCAGAAGTTCAGCGAGATATATGAAAAGATTGAGAACAGCAAAAGGCACCAGATGGCGGAACTGGAAAAGATGAGGATGGATTTCCATAAGGAATTGGAAATGCAGAAGAGGCAGATTTTAGAGAGAGTGCAAGCCGAGATTGCAAAAATAAGGCAGAGAGATGAAGAGAACGATGATTCAGCTGAGAATGATGTGTG 1226 0.3622 MDDTDDDARYPPNPYGFNHHQGYGSLNRQKLSARGSPYSHPVMNEYAEDNNDDEDEEEEEESEGGEDGLDQSNSIQHKDVDDNDAAADADGGGGGDDDDDEEEVEEGEDGEENDDHNDGHDNDKQRMEDDSEWNPKRRKLKSLISTYEFAPRVPPPSTVVPSVSKPSFGGRNSLTDWTEHETFVLLDAWGDRFLQHGRKSLRSEEWQEVAEKVSEVSKIERTDTQCRNRLDTLKKKYKKEKTKLAETGGGNSKWVYFKRMDKLMSSPPQQPGLSCGLDSGEYVFMNPRVYLNSANRLDEMKDSPGNSESTGEEEGLDGPRPKKRRHGRDNYEASSFRLLADSIQKFSEIYEKIENSKRHQMAELEKMRMDFHKELEMQKRQILERVQAEIAKIRQRDEENDDSAENDV 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02429 408 MobiDBLite consensus disorder prediction 91 116 - -
Bva02g02429 408 MobiDBLite consensus disorder prediction 20 34 - -
Bva02g02429 408 Gene3D - 177 239 - -
Bva02g02429 408 MobiDBLite consensus disorder prediction 150 173 - -
Bva02g02429 408 MobiDBLite consensus disorder prediction 48 67 - -
Bva02g02429 408 MobiDBLite consensus disorder prediction 117 137 - -
Bva02g02429 408 Coils Coil 43 63 - -
Bva02g02429 408 MobiDBLite consensus disorder prediction 1 137 - -
Bva02g02429 408 MobiDBLite consensus disorder prediction 296 330 - -
Bva02g02429 408 ProSiteProfiles Myb-like domain profile. 177 234 IPR001005 -
Bva02g02429 408 Coils Coil 350 381 - -
Bva02g02429 408 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 78 406 IPR044823 -
Bva02g02429 408 PANTHER OS01G0718900 PROTEIN 78 406 - -
Bva02g02429 408 MobiDBLite consensus disorder prediction 301 330 - -
Bva02g02429 408 Pfam Myb/SANT-like DNA-binding domain 176 263 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02429 Bva-Chr2 23439287 23441364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02429 336 407 Trihelix Transcription Factor Family AT3G14180 40.278 8.26e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva02g02429 Myb_DNA-bind_4 1.2e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02429 - - tcc:18595893 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02429 02 23439287 23441364 Bva02g02429 02 23439287 23441364 ECH