Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02413 ATGGATTTCTGGCCAGAATTTCTTGCAAGCAGTTGGGGAAGAGAATTTGTTGCAGGAGGCTTCGGGGGCATTGCTGGTATAGTCTCTGGTTATCCTCTTGACACTCTTCGCATTAGGCAACAGTCCTCGAACACTGGCTCTGCGTTTAGCATCCTTAGGCATGTGGTCGGGAAGGAAGGGCCTGCAGCTCTCTACAGAGGCATGGCCGCACCTTTGGCTTCCGTGACTTTTCAGAATGCAGTGGTTTTCCAAACTTACGCAATTCTGTCTAGAGCATTTGATTCATCTGTTCCTGCTAATGACCCTCCTTCATACAAAGGAGTTGCTCTAGGAGGGATTGGAACTGGTGCTTTACAAAGTCTACTGCTTTCTCCTGTAGAGTTGGTAAAAATTCGTCTTCAGCTGCAGAATAAAGGACAGTTGACAGAATTTCACAAGGGTCCTGTAACAGTGGCTAAGAACATATGGAGAACTGAGGGTTTTCGTGGCATATATAGAGGCCTTGGCATCACTGTGCTTAGAGATGCACCTTCTCATGGTTTCTATTTCTTTACATATGAATACATGAGGGAACGACTTCACCCCGGTTGCAGAAAAAATTGTCAAGAAAGCTTAAATACTATGCTAATAGCCGGAGGACTAGCTGGGGTTGCAAGTTGGATCTGTTGTTATCCATTAGATGTGATCAAAACTAGACTACAAGCTCAATCACCAACTTCGCTGAAATATAACGGCATTCTTGATTGCCTTAGAAAGATCATTAAAGAAGAAGGATATGCTGTGCTCTGGCGGGGTTTAGGAACTGCCGTTGCTAGAGCTTTTGTAGTGAATGGTGCTATATTTTCTGCTTATGAGATTGCTCTGAGGTGTCTATTTAGCAATGGGAATATTCCAATGGAGGAACAGATGGAGGAAACAATGTA 923 0.441 MDFWPEFLASSWGREFVAGGFGGIAGIVSGYPLDTLRIRQQSSNTGSAFSILRHVVGKEGPAALYRGMAAPLASVTFQNAVVFQTYAILSRAFDSSVPANDPPSYKGVALGGIGTGALQSLLLSPVELVKIRLQLQNKGQLTEFHKGPVTVAKNIWRTEGFRGIYRGLGITVLRDAPSHGFYFFTYEYMRERLHPGCRKNCQESLNTMLIAGGLAGVASWICCYPLDVIKTRLQAQSPTSLKYNGILDCLRKIIKEEGYAVLWRGLGTAVARAFVVNGAIFSAYEIALRCLFSNGNIPMEEQMEETM 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02413 307 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 293 - -
Bva02g02413 307 SUPERFAMILY Mitochondrial carrier 12 285 IPR023395 -
Bva02g02413 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Bva02g02413 307 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Bva02g02413 307 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Bva02g02413 307 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Bva02g02413 307 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Bva02g02413 307 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 293 - -
Bva02g02413 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Bva02g02413 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Bva02g02413 307 Pfam Mitochondrial carrier protein 11 93 IPR018108 -
Bva02g02413 307 Pfam Mitochondrial carrier protein 110 193 IPR018108 -
Bva02g02413 307 Pfam Mitochondrial carrier protein 208 293 IPR018108 -
Bva02g02413 307 Gene3D Mitochondrial carrier domain 13 296 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02413 Bva-Chr2 23383987 23386826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02413 1 298 Antiporters AT1G79900 72.910 2.70e-151 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02413 K15109 - gmx:100812056 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02413 02 23383987 23386826 Bva02g02413 02 23383987 23386826 ECH