Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02390 ATGAGCGGTACATTTAAAGTTTTCAACAAACAAGTCAGGCTACTTTACTTCCATAAACGCTCCACAGCTCATTGTGGTTTCATAAATCCTCCTCTCGGTCTCTTTCTACATCCTAAATACCCCAGTTTTTGCTTCTCGGTATCTCGGCCATACTCCTCATTTCCTTCTGCTACATTTATGGAAGTGGTCAAAGCAGTTGCCAAACAAGGACTTTCAAGTCCTGACAGTGTTGCTATCAGAGCTGATCAGAAAAGTTACAGTTACATTCAGCTTATCTTGTCTGCACAGAAGATATCTAATCTTTTATGTAGCAGCAATGTGAAAACAGGACATCTTGGTGGAGCTCGAATAGGAATTGTGGCCAAACCTTCTGCTGAGTTTGTTGCTGGGATACTGGGGACTTGGTTTAGTGGAGGTGTTGGTGTGCCTCTTGCACTCAGCTATCCAGAAGCGGAGCTCTTGCATGTGATAAATAATTCGGATGTCTCAGTCATACTGAGTACTGGAGATCATGATGAACTAATGCAAAATCTTGCCAATAAAAGCTCTgctcaattttttcatattcccCCTGTTCCTAGTAAGTCTTTGGAGAAAGGTGGAGATGAAATTTCTCAAGTTAGAGAAATTGACGCAGACAGAATTTTTCAGGGTAGTAGTGAAATACCAAGTGAGGATCCGGCATTGATTTTGTATACTAGTGGGACAACAGGTAAACCAAAGGGAGTTGTTCACACACATAGAAGCATCACTGCCCAGGTCGAAACTTTGGCAAAAGCGTGGGAGTACACATTTACTGATCAATTTCTGCATTGCTTGCCTCTACACCATATCCAAGAAAGTTTTCATGTGTATTTTATTAGTGGTTATATGATTATGTTAAGCTTATTATCTCCTTTAGTTGTGAGGGGAATATGGCAGAGATGGCGTGAATCTTATCCAGCTAAAGGAACCAAGTCCGATGATGCTATAACTGTATTTACTGGAGTTCCAACAATGTATACCCGATTGATACAAGGTTACCAAGCAATGGATCCTGAGCTGCAAGCTGCTTCAGCATCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGATCTTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAGGCCATCACTGGGCATCGGTTGTTGGAGCGGTATGGCATGACTGAATTTGTCATGGCATTATCAAATCCTTTGAAAGGTGAGCGGAAAGCAGGCACGGTTGGCAAACCTTTTCCTGGCGTGCAGGTCAAGATTCTTGCTGATGAGGAGAGTGGAAGTGATACAACTACAGTGGGTGAACTTTGCGTTAAAAGCCCTTCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACACAGGAATCATTTATTGATGATGGTTTCTTTAAGACTGGAGATGCAGTTACTACGGATGAAGATGGATATTATATCATTCTGGGACGTACTAACGCTGATATAATGAAGGTCGGTGGCTATAAACTGTCTGCGTTAGAAATTGAATCAGTCATATTAGAGCATCCTGCTGTCTCCGAATGCTGTGTGTTAGGCTTACCTGACAAAGATTACGGAGAAGTCGTTTCTGCAATTATTGTGCCAGAGGTTGAAGCTAAAAGAAAAGCGGATGAAGAGTCAAAACCTGCTATAAGCTTAGAAGAATTATCCAGCTGGGCAAAACACAGATTGGCGCCTTACAAGATACCAACTCGACTATTCCTGTGGGATTCACTCCCTCGCAATGCCATGGGCAAGGTTAACAAGAAAGAGTTGAAGAAATCACTGGCTACAGAACAGTG 1805 0.4183 MSGTFKVFNKQVRLLYFHKRSTAHCGFINPPLGLFLHPKYPSFCFSVSRPYSSFPSATFMEVVKAVAKQGLSSPDSVAIRADQKSYSYIQLILSAQKISNLLCSSNVKTGHLGGARIGIVAKPSAEFVAGILGTWFSGGVGVPLALSYPEAELLHVINNSDVSVILSTGDHDELMQNLANKSSAQFFHIPPVPSKSLEKGGDEISQVREIDADRIFQGSSEIPSEDPALILYTSGTTGKPKGVVHTHRSITAQVETLAKAWEYTFTDQFLHCLPLHHIQESFHVYFISGYMIMLSLLSPLVVRGIWQRWRESYPAKGTKSDDAITVFTGVPTMYTRLIQGYQAMDPELQAASASAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKAGTVGKPFPGVQVKILADEESGSDTTTVGELCVKSPSLFKEYWKLPEVTQESFIDDGFFKTGDAVTTDEDGYYIILGRTNADIMKVGGYKLSALEIESVILEHPAVSECCVLGLPDKDYGEVVSAIIVPEVEAKRKADEESKPAISLEELSSWAKHRLAPYKIPTRLFLWDSLPRNAMGKVNKKELKKSLATEQ 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02390 601 Pfam AMP-binding enzyme C-terminal domain 502 587 IPR025110 -
Bva02g02390 601 SUPERFAMILY Acetyl-CoA synthetase-like 49 597 - -
Bva02g02390 601 Gene3D - 63 485 IPR042099 -
Bva02g02390 601 Gene3D - 488 601 IPR045851 -
Bva02g02390 601 PANTHER MALONATE--COA LIGASE-LIKE 35 600 - -
Bva02g02390 601 ProSitePatterns Putative AMP-binding domain signature. 230 241 IPR020845 -
Bva02g02390 601 Pfam AMP-binding enzyme 71 492 IPR000873 -
Bva02g02390 601 CDD MCS 75 595 - -
Bva02g02390 601 PANTHER ACYL-COA SYNTHETASE 35 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02390 Bva-Chr2 23277008 23283194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02390 222 599 Monolignol Biosynthesis Gene Families AT4G19010 29.049 5.25e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02390 K18660 - gmx:100813324 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02390 02 23277008 23283194 Bva02g02390 02 23277008 23283194 ECH