Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02387 ATGATGGCTGGAAACCCTAACTGGTGGAGCATGCATCCACCATCTCTGATCCCTCCCCAGTATGTGCTTGGATCTTCTTCAATTCCTTTCAATTCTTTGACAGAGAACCCAGCTGAGCCCACTCACTCATGGAGCCAACTGCTTTTCAGCGCGGAATTACCAGGAGAAGAGCGATTGGGGGTCAGTcattttcaaccaaaaaggCTGGAAATTTGGGATGATCAAATTGTTCATCCATCCTCAAGAGTTACTAGTACTTTTGATGTGATAAAGCAAGAGACTTCCCATAGTACTGGCAACTTGTACGGTCATGGGCATGGGCATGGGCATGAAGAATTTCATGCTTCTGGACCGGCTGGGTCTTGGCCAAACCTACACATGGTGCCTGTTTCTTCCCCTAGCTCCTGTGTCACTAGCTTGTGTAGCAATAATATATTGGATTTCGCTTATAATAACAAGGCAGATCATAAGAAGCATCAATTACCAGATCATACATCTGAGTGTAATAGCACATCTGCTGGTGGAGTTTGTAAGAAAGCTAGGGTTCAACCATCTTCAAGCCAACCACCTCTGAAGGTGAGAAAGGAGAAGCTAGGAGATAGAATAACAGCACTTCATCAGCTAGTTTCCCCATTCGGAAAGACTGACACGGCTTCTGTCTTGCTAGAAGCCATTGGATACATCAGATTCCTTCAGGGTCAAATTGAGGCACTCAGTTCCCCTTACTTGGGCAATGCATCAAAAAACATGAGGAATCAGCAGCCTgTACATGGAGCTGAAAGGAGCTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGgcctgaaaagaaaagaagctccAAATCAGGATGCGGAAGATAAACCAAAGGACTTGAGGAGCATAGGGTTGTGCTTGGTGCCTGTATCTTGCACCCAGCATGTTGGAAGTGAAACTGGAGCTCATTATTGGGCACCAGCCTATGGCAGCGGATTTTG 986 0.4442 MMAGNPNWWSMHPPSLIPPQYVLGSSSIPFNSLTENPAEPTHSWSQLLFSAELPGEERLGVSHFQPKRLEIWDDQIVHPSSRVTSTFDVIKQETSHSTGNLYGHGHGHGHEEFHASGPAGSWPNLHMVPVSSPSSCVTSLCSNNILDFAYNNKADHKKHQLPDHTSECNSTSAGGVCKKARVQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNASKNMRNQQPVHGAERSSVFPEDPGQLLNDNGLKRKEAPNQDAEDKPKDLRSIGLCLVPVSCTQHVGSETGAHYWAPAYGSGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02387 328 Gene3D - 192 254 IPR036638 GO:0046983
Bva02g02387 328 CDD bHLH_AtbHLH_like 192 239 IPR045239 -
Bva02g02387 328 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 19 315 - -
Bva02g02387 328 MobiDBLite consensus disorder prediction 246 292 - -
Bva02g02387 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 192 243 IPR036638 GO:0046983
Bva02g02387 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 182 231 IPR011598 GO:0046983
Bva02g02387 328 PANTHER OS05G0228400 PROTEIN 19 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02387 Bva-Chr2 23267444 23270767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02387 64 272 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 50.000 4.51e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02387 - - gmx:100802121 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02387 02 23267444 23270767 Bva02g02387 02 23267444 23270767 ECH