Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02385 ATGTCTGCACCGTTAGAACATGATTACATTGGCTTAGCAGAGAACCCGTCCATGGAAAGAAGCTCTGAGAAAATTCCCTCTTCTGCTTCCTCCACCCTCTCCTCTGAGGATGAAAAGAGCTCATCTTTGAACTTCAAGGAAACAGAGCTCAGGCTTGGACTCCCTGGTTGCAAGTCTCCAGAGAGAAAACCTGCAACTGGGGTCTCTCTTTTTGGAAAGGATTTGCAGAATGGGTGTTCTTCTGCAAGCCCTTTGAAGAACCTTGTCTCTGGGGCCAAGAGGGGCTTTTCTGATGCTATTGACGGGTCTTCTGGGAAATGGGTTTTCTCTGTGAGTGATGGATCTGAGGTTGATTTAGGGAAAGGTGCTGCCTTGTTCTCCCCCAGAGGTGGAAATGGTGGAAAGCCTCATCATCTGGGTTTAGAGGGTAAAGTTAATAGCCTGCACGgctctgcttctgcttctgcccCTGCACAAACCATCAAGGAGGTTACCGCAAAACCAGTTCTCGAGAAGAAGCCTCAGGTTCCTGCTCCTAGTGAGCATCTTGCTGCTCCTGCTGCAAAGGCGCAGGTTGTGGGATGGCCACCAATCAGATCTTTCCGAAAGAACTCCATGGCTtgtaattctaattctaatgcAACAAAGAACAATGATGAAGGTGAAGGCAAAGATGGGTTTGGTTGTCTCTATGTAAAGGTTAGCATGGATGGCGCCCCATATCTTAGAAAGGTTGATCTGAAAACCTACAACAACTATGTTGAACTTTCTTCTGCTCTCGAGAAGATGTTCAGCTGCTTTACCATTGGTCAATGCAGTTCTCGCGGGCTTCCGGGGAAAGATGGCCTTAGTGAGAGCTCTCTGAGGGATCTCCTTCATGGCTCTGAATATGTTCTTACATACGAAGATAAAGATGGAGATTGGATGCTTGTTGGTGATGTACCCTGGGAGATGTTCACCGACTCATGTAGGAGGCTAAGGATCATGAAAGGTTCCGAGGCAATTGGGCTAGCTCCAAGGGTAATGGAAAAATCCAGGAGCCAGACCTA 1049 0.4595 MSAPLEHDYIGLAENPSMERSSEKIPSSASSTLSSEDEKSSSLNFKETELRLGLPGCKSPERKPATGVSLFGKDLQNGCSSASPLKNLVSGAKRGFSDAIDGSSGKWVFSVSDGSEVDLGKGAALFSPRGGNGGKPHHLGLEGKVNSLHGSASASAPAQTIKEVTAKPVLEKKPQVPAPSEHLAAPAAKAQVVGWPPIRSFRKNSMACNSNSNATKNNDEGEGKDGFGCLYVKVSMDGAPYLRKVDLKTYNNYVELSSALEKMFSCFTIGQCSSRGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRVMEKSRSQT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02385 349 ProSiteProfiles PB1 domain profile. 229 331 IPR000270 GO:0005515
Bva02g02385 349 Gene3D - 225 343 - -
Bva02g02385 349 PANTHER AUXIN-RESPONSIVE PROTEIN 6 341 - -
Bva02g02385 349 Pfam AUX/IAA family 47 340 IPR033389 -
Bva02g02385 349 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 6 341 IPR003311 GO:0005634|GO:0006355
Bva02g02385 349 MobiDBLite consensus disorder prediction 1 47 - -
Bva02g02385 349 SUPERFAMILY CAD & PB1 domains 229 330 - -
Bva02g02385 349 MobiDBLite consensus disorder prediction 20 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02385 Bva-Chr2 23247771 23250284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02385 233 339 B3 DNA Binding Superfamily AT4G23980 30.841 2.69e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Bva02g02385 AUX_IAA 2.8e-91 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02385 K14484 - jre:109000692 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02385 02 23247771 23250284 Bva02g02385 02 23247771 23250284 ECH