Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02375 atggcTGAACCCACCTATTCTGAATCTGCTAGCACCAGCAAAGACCAGGAAACAGAGCCTAAAGAAGAGAGCAGAGCCAAGAGAACCAGGGATTGCAGCAAGCACCCTGTTTACCATGGCGTCCGAATGCGAAGTTGGGGCAAATGGGTATCTGAAATTCGCGAACCCCGCAAGAAATCTCGCATCTGGCTTGGTACTTTCGCCACGCCAGAAATGGCAGCGCGAGCCCACGATGTTGCGGCTTTGAGCATTAAAGGTCAGTCGGCAATTTTGAACTTTCCACAAATAGTTGATATGCTTCCCAGACCAGTCACGTTGACCCCGCGCGACATCCAAGCTGCTGCCGCAGAAGCAGCAGCCATGGTTAAATTCGACCGAGCGGTGCAAtcagattcttcttcttcgtcaTTGTCATCGTCGTCGGCACCTCAATCTTTATCGGAACAATCAGACTCGTCGGAGCTCAGCGAGATAGTTGAATTGCCCAATATAGAGGAAAGCTTCGACACCGCAGACTCCAGAACCGACTTTATATTGATCGACTCGGTGGATAGTTGGGTGTATCCGACAGTGGGGTTGGAGGAGGTTGAATTCTCGGCTAATTTTCCAGAGGAATTATTCCCGCGAGAGAATAGTTTTATTACGAGTGACTCCGAGATATCACTCTGGGAATA 674 0.4807 MAEPTYSESASTSKDQETEPKEESRAKRTRDCSKHPVYHGVRMRSWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGQSAILNFPQIVDMLPRPVTLTPRDIQAAAAEAAAMVKFDRAVQSDSSSSSLSSSSAPQSLSEQSDSSELSEIVELPNIEESFDTADSRTDFILIDSVDSWVYPTVGLEEVEFSANFPEELFPRENSFITSDSEISLWE 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02375 224 Pfam AP2 domain 36 86 IPR001471 GO:0003700|GO:0006355
Bva02g02375 224 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Bva02g02375 224 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Bva02g02375 224 MobiDBLite consensus disorder prediction 1 36 - -
Bva02g02375 224 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 190 - -
Bva02g02375 224 MobiDBLite consensus disorder prediction 14 36 - -
Bva02g02375 224 Gene3D AP2/ERF domain 37 96 IPR036955 GO:0003700|GO:0006355
Bva02g02375 224 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Bva02g02375 224 MobiDBLite consensus disorder prediction 131 153 - -
Bva02g02375 224 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Bva02g02375 224 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 6 190 - -
Bva02g02375 224 CDD AP2 38 94 IPR001471 GO:0003700|GO:0006355
Bva02g02375 224 SUPERFAMILY DNA-binding domain 37 95 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02375 Bva-Chr2 23203620 23204639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02375 7 189 AP2-EREBP Transcription Factor Family AT5G11590 60.000 3.43e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva02g02375 AP2 2.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02375 K09286 - gmx:100801780 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02375 02 23203620 23204639 Bva02g02375 02 23203620 23204639 ECH