Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02367 ATGGAAGTCCCAGAATACTTCGTCGGTGGCTATTTTAATGCCGGGGCAGACCAATTTTCGCCGGAGAAGCGACATGGTGACCAGAAAGCCGGCGAACCCTTCGTCATTGACGACCTCCTTGACTTCTCTAACGAAGACGCCATTGTATCCGATGGTTTCTTTGGTAATGTCGCCGGAAACTCCACTGAACCTTCCTCTGTTACCGCTGTTGACAGCTGCAACTCCTCAATTTCTGGTAACGACAACCGTCTCCCCGGAAACGTTGCCTCTCGAGGCTTCGGTGATCCTCATTTCTCAGGCGAACTTTGTGTTCCGTATGACGACTTGGCTGAGCTAGAATGGCTATCGAACTTTGTGGAAGACTCATTCTCAGCCGAAGAAGAGCTAAAAACGCTCCACCTTCTTTCCGGAGCCACCGCTTCCACCATTGGCACGAAACCCCAGACGCCAGAATCATCATCGTCCTCCGAAACAGTTCCACCATTCGCTGCCGAAGCCTCTCGAAACGCACCGTTTTTCCATCCGGAAACTCCGCTTCCGGGCAAGGCACGGAGCAAGCGTTCACGCGCCGCTCCCGGGGATTGGTCCACGCGCCTCCTCCACCTCGTCACCCCAACACTCAGCGACACAACGACCGAACAGAAACCGAACAAACCAACTCCGGCCAAGAAGAGGGAGAGTTCTAATTCGGACTCTTCGGGCCGGAAATGTTTGCACTGCGCCGCCGAGAAGACCCCTCAATGGCGAACCGGACCCATGGGCCCAAAGACGCTGTGCAATGCTTGTGGAGTTCGATACAAGTCCGGGAGATTGGTGCCGGAATACCGTCCGGCGGCGAGCCCGACGTTTGTGTCGGCGAATCATTCCAATTCGCACAGGAAGGTATTGGAGCTGAGAAGGCAAAAAGAGTTGCAACGGCATCAACATCAGCGTCAGCATCAGCACCACTTGCTTAGTCAGAGTTCGCTTTTCGGGGTATCCAACGGTGGAGATGATTACTTGATCCACCATCATACTGGGCCAGACTATAGGCAAATTATTTA 1043 0.5379 MEVPEYFVGGYFNAGADQFSPEKRHGDQKAGEPFVIDDLLDFSNEDAIVSDGFFGNVAGNSTEPSSVTAVDSCNSSISGNDNRLPGNVASRGFGDPHFSGELCVPYDDLAELEWLSNFVEDSFSAEEELKTLHLLSGATASTIGTKPQTPESSSSSETVPPFAAEASRNAPFFHPETPLPGKARSKRSRAAPGDWSTRLLHLVTPTLSDTTTEQKPNKPTPAKKRESSNSDSSGRKCLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSANHSNSHRKVLELRRQKELQRHQHQRQHQHHLLSQSSLFGVSNGGDDYLIHHHTGPDYRQII 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02367 347 PANTHER GATA TRANSCRIPTION FACTOR 9 1 347 - -
Bva02g02367 347 MobiDBLite consensus disorder prediction 201 217 - -
Bva02g02367 347 PIRSF Txn_fac_GATA_plant 19 326 IPR016679 GO:0003677|GO:0005634|GO:0045893
Bva02g02367 347 MobiDBLite consensus disorder prediction 218 232 - -
Bva02g02367 347 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 232 294 - -
Bva02g02367 347 SMART GATA_3 231 281 IPR000679 GO:0006355|GO:0043565
Bva02g02367 347 CDD ZnF_GATA 236 283 IPR000679 GO:0006355|GO:0043565
Bva02g02367 347 PANTHER GATA TRANSCRIPTION FACTOR 1 347 - -
Bva02g02367 347 Pfam GATA zinc finger 237 270 IPR000679 GO:0006355|GO:0043565
Bva02g02367 347 ProSitePatterns GATA-type zinc finger domain. 237 262 IPR000679 GO:0006355|GO:0043565
Bva02g02367 347 ProSiteProfiles GATA-type zinc finger domain profile. 231 267 IPR000679 GO:0006355|GO:0043565
Bva02g02367 347 MobiDBLite consensus disorder prediction 141 162 - -
Bva02g02367 347 MobiDBLite consensus disorder prediction 141 236 - -
Bva02g02367 347 Gene3D - 231 281 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02367 Bva-Chr2 23168549 23170258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02367 30 347 C2C2-Gata Transcription Factor Family AT4G32890 47.164 3.00e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bva02g02367 GATA 2.1e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02367 - - gmx:100776605 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02367 02 23168549 23170258 Bva02g02367 02 23168549 23170258 ECH