Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02366 ATGGCAATGTCCTGCAAGGATGGTAAAGGGGGAATGGACAATGGCAAATATGTCCGTTATACACCTGAGCAGGTTGAGGCCCTTGAGAGGCACTATCATGAATGCCCAAAACCCAGTTCCATACGCCGCCAGCAGCTTATCCGTGAGTGCCCAATTCTCTCAAACATTGAGCCTAAACAAATCAAAGTTTGGTTCCAGAACAGAAGATGTCgggagaaacaaagaaaagaggcTTCACGCCTTCAAGCTGTTAATAGGAAACTGACAGCCATGAACAAGCTTCTGATGGAGGAGAATGATAGGTTGCAGAAGCAGGTCTCTCAGTTGGTGTACGAAAATGGCTGCTTTCGACAACATACCCAAAatACGACTCTTGCAACCAAAGACACAAGTTGTGAATCAGCCGTGACGAGTGGTCAAAACAGTTTGACAACTCAGCATCCTCCAAGAGATGCTAGTCCTGCAGGGCTTTTGTCCATTGCAGAGGAAACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGAACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGTGTGGCAGCACGAGCCTGTGGCCTGGTGGGTCTAGAGCCAACAAGGGTTGCAGAAATCCTCAAGGATCGACCTGCATGGTTTCGTGATTGCCGAGCTGTTGACATTCTAAATGTGCTGCCCACAGCAAATGGTGGAACCATAGAGCTGCTTTATATGCAGCTATATGCACCAACAACGCTGGCACCTGCTCGGGACTTCTGGTTGTTGCGCTACACTTCTGTTTTAGAAGATGGTAGCCTCGTGGTCTGTGAGAGGTCTCTTAAAAACACTCAAAATGGTCCAAGCATGCCACCTGTTCAGAATTTCGTGAGAGCAGAGATGCTGCCTAGTGGGTACCTTATAAGGCCTTGTGAAGGGGGTGGTTCTATCATCCATATTGTTGATCATATAGATTTGGAgCCATGGAGTGTGCCCGAGGTATTGCGTCCACTGTATGAATCATCAACGGTGCTGGCTCAGAAGACAACAATGGCGGCCCTACGTCAGCTGAGGCAGATCTCTCATGAAGTTTCTCAGTCTAATGTCACCGGGTGGGGCAGACGACCTGCAGCTCTGCGAGCGCTTAGCCAGAGACTCAGCCGGGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGTTGGTCAATGATTGGCAATGATGGTGTGGATGATGTTACAATTCTAGTGAATTCATCCCCTGACAAGTTAATGGGCTTAAATCTTTCCTTTGCGAATGGGTTTCCATCTGTTAGTAATGCAGTCTTGTGTGCCAAAGCGTCAATGCTGTTACAGAATGTGCCTCCTGCCATTCTCCTGCGGTTCCTTCGTGAGCATAGGTCAGAATGGGCAGACAATAACATGGATGCTTACTCGGCTGCTGCCATTAAAGTTGGCCCTTGTAGCCTGCCAGGATCTCGTGTTGGAAATTATGGGGGTCAAGTTATACTTCCTCTTGCCCACACGATAGAGCATGAAGAGTTTTTGGAAGTTATTAAATTGGAAGGAATTGCTCATTCTCCTGAAGAGACAATCATGCCTAGAGAGATGATTCTTTTGCAACTCTGCAGTGGAATGGATGAGAACGCTGTTGGTACCTGTGCCGAACTTATATTTGCTCCAATTGATGCATCATTTGCTGATGACGCTCCTCTTTTACCCTCTGGGTTCCGTATTATTCCTCTTGATTCTGGGAAGGAAGCCTCAAGTCCAAATCGCACACTTGACCTTGCATCTGCTCTTGACGTTGGCCCCACTGGAAATAAAGCATCCAATGATTATTCTGGAAATTCTGGCTGTATGAGATCTGTGATGACAATAGCATTTGAATTTGCATTCGAAAGTCATATGCAAGAGCATGTAGCAACAATGGCACGGCAATATGTTCGCAGCATTATATCATCCGTTCAAAGGGTGGCATTAGctctttctccttctcatTTGAGTTCACATGCTGGGCTGAGGCCATCGTTGGGTACTCCTGAAGCACAGACACTTGCTCGTTGGATCAGCAACAGCTACAGGTGCTACTTGGGTGTGGAGCTACTGAAATCCAATAATGAGGGGAACGAATCCATCTTAAAGGCCTTGTGGCATCACTCAGATGCAATTTTGTGCTGCACTCTGAAgGCATTGCCAGTGTTCACTTTTGCAAACCAGGCAGGGCTTGACATGCTGGAGACTACCTTAGTTGCATTACAAGACATAACCTTGGAGAAGATATTTGATGACCATGGACGGAAGATTCTCTGTTCAGAGTTTCCCCAGATTATACAACAGGGCTGTACGTGTCTTCAAGGTGGTATCTGTCTCTCAAGCATGGGAAGACCTGTCTCGTACGAGAGAGTAGTTGCCTGGAAGGTGCTgaatgaagaagagaatgcTCATTGCATCTGCTTTATGTTTGTGAACTGGTCCTTTGTTTG 2513 0.458 MAMSCKDGKGGMDNGKYVRYTPEQVEALERHYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGCFRQHTQNTTLATKDTSCESAVTSGQNSLTTQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPAWFRDCRAVDILNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSMPPVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHIDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQISHEVSQSNVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMIGNDGVDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYSAAAIKVGPCSLPGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGIAHSPEETIMPREMILLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPNRTLDLASALDVGPTGNKASNDYSGNSGCMRSVMTIAFEFAFESHMQEHVATMARQYVRSIISSVQRVALALSPSHLSSHAGLRPSLGTPEAQTLARWISNSYRCYLGVELLKSNNEGNESILKALWHHSDAILCCTLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKILCSEFPQIIQQGCTCLQGGICLSSMGRPVSYERVVAWKVLNEEENAHCICFMFVNWSFV 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02366 837 SUPERFAMILY Bet v1-like 396 595 - -
Bva02g02366 837 Pfam Homeodomain 16 74 IPR001356 GO:0003677
Bva02g02366 837 Coils Coil 71 112 - -
Bva02g02366 837 ProSiteProfiles 'Homeobox' domain profile. 11 75 IPR001356 GO:0003677
Bva02g02366 837 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 837 IPR044830 GO:0003700
Bva02g02366 837 SMART HOX_1 13 79 IPR001356 GO:0003677
Bva02g02366 837 SMART START_1 159 369 IPR002913 GO:0008289
Bva02g02366 837 SUPERFAMILY Homeodomain-like 15 79 IPR009057 -
Bva02g02366 837 CDD START_ArGLABRA2_like 154 369 - -
Bva02g02366 837 CDD homeodomain 16 76 IPR001356 GO:0003677
Bva02g02366 837 Pfam START domain 160 368 IPR002913 GO:0008289
Bva02g02366 837 PANTHER CLASS III HD-ZIP PROTEIN CNA1 1 837 - -
Bva02g02366 837 SUPERFAMILY Bet v1-like 159 368 - -
Bva02g02366 837 ProSiteProfiles START domain profile. 150 365 IPR002913 GO:0008289
Bva02g02366 837 Gene3D - 9 82 - -
Bva02g02366 837 CDD bZIP 68 107 - -
Bva02g02366 837 Pfam MEKHLA domain 694 836 IPR013978 -
Bva02g02366 837 Gene3D - 194 378 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02366 Bva-Chr2 23156242 23163920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02366 1 789 Homeobox Transcription Factor Family AT1G52150 86.237 0.0 1414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva02g02366 START 7.2e-54 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02366 K09338 - zju:107428556 1589.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02199 08 14428959 14436781 Bva02g02366 02 23156242 23163920 BWGD
Bva02g02366 02 23156242 23163920 Bva02g02366 02 23156242 23163920 ECH