Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02359 ATGCACTCTTATCTTCGCGGCTCTTTATCGCCAGTCTTCCTTCTCTGTGATTCTTATTCTCTCGCTGCAACTGATCGGCGGTGGCGCGACCGGGTCAAGCGGAAGAGAATCGGAATGACTCGTCGGTGCTCTCACTGTAGCAACAACGGGCATAACTCCCGAACATGCCCATCTCGCAGTGGTGGTGGTGCTAGTGGGGGTGTGAAGCTTTTCGGCGTGAGACTCACCGATGGGTCAATCATCAAGAAGAGCGCCAGCATGGGGAACCTTTCCGCCCATTACCATTCTTCTTCATCCGCGGCTGCATCACCCAATCCCAGCTCCCCCAGCTCTGACCCTCTGCGTGACCCACTTCATCAACCTGAAGGATACTTGTCCGATGACCCAGCCCATGCGTCCACTTCTGTAAACCTCcgtggagaaagaaaaaaagGCGTTCCCTGGACTGAAGAAGAACATAGGCGATTCTTAATTGGTCTCCAGAAACTGGGCAAAGGAGACTGGCGTGGTATAGCACGTAAGTACGTTGTGACAAGGACTCCTACTCAAGTAGCTAGTCATGCCCAGAAGTACTTTATTCGACAAAGTAATGCTACCCGGAGAAAGAGACGTTCCAGTCTTTTTGACATGGTTCCAGATATGGCTTCAGATCCACCTTCAGTGCCGGAAGAACAAGTGTTATTGCCACCTTCTGAAAACGCACAACCTGGCAATGCAATATCACAACCATCATTAAATCTCTCTCTGAAGTCAGAGTTTGATCCCATGGAAGCTACTTGtcaagaaaatatggaagaACCCAATGAAGCCATTATGAAGTCAAGTGGGTTGACACCAATGGCTCCTGGACTCTTTCCAACTTATTTACCTGTCCCGTTTTCGATATGGCCGCCTGCTCGCGTAGAAGAATTTAATGGAGCAGAGGCGTCTCATCATCAGGTGGTCAAGCCAATTCCGGTCGTTCCGAAGGAACCTGTCAATGTCGACGAACTTGTTGGCATGTCCCAGTTGAGTCTTGGAGAAACGCTGGCACGTGACAGAGAGTCTTCCCCACTTTCCTTGAAGTTGATAGGAGAGCCCTCAAGGCAGTCAGCATTCCATGCCAATACTCAAGACATTCTTGATGAGGAACAGAAGCAAAGATATTTTTTCAGCTTCTTCAATAGCTA 1169 0.4808 MHSYLRGSLSPVFLLCDSYSLAATDRRWRDRVKRKRIGMTRRCSHCSNNGHNSRTCPSRSGGGASGGVKLFGVRLTDGSIIKKSASMGNLSAHYHSSSSAAASPNPSSPSSDPLRDPLHQPEGYLSDDPAHASTSVNLRGERKKGVPWTEEEHRRFLIGLQKLGKGDWRGIARKYVVTRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVPDMASDPPSVPEEQVLLPPSENAQPGNAISQPSLNLSLKSEFDPMEATCQENMEEPNEAIMKSSGLTPMAPGLFPTYLPVPFSIWPPARVEEFNGAEASHHQVVKPIPVVPKEPVNVDELVGMSQLSLGETLARDRESSPLSLKLIGEPSRQSAFHANTQDILDEEQKQRYFFSFFNS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02359 389 SMART sant 144 194 IPR001005 -
Bva02g02359 389 MobiDBLite consensus disorder prediction 95 147 - -
Bva02g02359 389 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 143 195 IPR006447 GO:0003677
Bva02g02359 389 Gene3D - 146 197 - -
Bva02g02359 389 Pfam Myb-like DNA-binding domain 147 192 IPR001005 -
Bva02g02359 389 MobiDBLite consensus disorder prediction 95 114 - -
Bva02g02359 389 PANTHER OS01G0187900 PROTEIN 39 371 - -
Bva02g02359 389 CDD SANT 147 192 IPR001005 -
Bva02g02359 389 SUPERFAMILY Homeodomain-like 142 197 IPR009057 -
Bva02g02359 389 ProSiteProfiles SANT domain profile. 148 196 IPR017884 -
Bva02g02359 389 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 196 IPR017930 -
Bva02g02359 389 PANTHER TRANSCRIPTION FACTOR KUA1 39 371 - -
Bva02g02359 389 ProSiteProfiles Myb-like domain profile. 140 192 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02359 Bva-Chr2 23103678 23107734 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva02g02359 Myb_DNA-binding 2.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02359 - - gmx:778036 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02359 02 23103678 23107734 Bva02g02359 02 23103678 23107734 ECH