Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02353 ATGATTCTTGTACGGAAATCCCAGTTGAAGTTGCTgcactttcttctctttctgctTCACCTTCAATCCCTCTGTTCTTACCCAACACCCATGAGCTGTGCGGATACAACCCGCTTGTGCACATCTTTCTTAGCTTTTAAGCCTCAACCGAACCAGACGCTGGCTGTCTTACAGAGTATGTTCGATGTGCTGCCCAACGACATCACTGTTGAAGGGAATGGCTGGGATTACGTATTTATCAGGAAGAACTGTTCTTGTGCTGCTGGTGCAAAGAAATATGTATCTAATACTACCTTCACTGTAAGATCAAATGTAGGTTATGTCTATGACTTGGTGATGGATGCCTATGATGGGCTTGCTATATTGCCCAACACGACCCGGATGGCAAAACTTGGTGCTGTGATATCAGTGAGGTTGTTTTGTGGATGCTCCACTGGTCCATGGAACTATTTGGTGAGTTATGTCATGAGAGATGGGGATAGTATTGGATCTTTGGCGAGTCGTTTTGGCGTTAGTATGGATAACATTGAAAATGTAAATGGCATAAGTAATCCTGATAATGTTACCGTGGGTTCTCTGTATTATGTACCTCTGGATTCAGTTCCTGGTGAGCCATATCCCCTGAAGAACGATACTCCTTCAGCTCCTGTTCCTGCTCCATCTGATGATAATTTTTCAGCTAATCAATCTAATCATAAGGCTCATGTACCTTACCGATGGATCATTGGAGGTCTAGCGGTTGGCCTTACTTTGATAATATTAAGCATAATCCTTTATGTTTCTCTGAGGTCATCAAATCGTTTCGCTAAAGCCAGAAGGAGTCATGCAAAAGATGCTGATAGCAAGGTCTCTCATAACTTTCATATTCTTCGGAATCCAAGTTTCTGTTGTGGTTCAGGAAGGTATATATGTGGAAAACCTGTAGAGCAGAAGAAAACTGATGGTGAATCCAGCAATCACCAGATAACCATTCCGAAAGTTTCAACTTTAGGGACTGATGTATTTGACGTGGACGTGGATAAGCCTGTAGTTTTCACATATGAAGAGATTTTCTCCTCAACTGATGGTTTCTCTGATTCGAATCTACTTGGGCATGGAACATATGGTTCTGTTTATTATAGTCTCCTTCGCGACCAGgAAGTTGCTATTAAAAGAATGACTGCTACAAAATCTAAGGAATTTATGTCAGAGATGAAAGTCCTCTGCAAGGTTCATCATACAAACCTGGTAGAATTGATCGGTTATGCAGCTAGTCATGATGAGCTTTTCCTTATTTATGAATACGCCCAGAAAGGCTCACTCAAAAGTCATCTGCATGATCCTCAGAATAAGGGCCATTCTCCACTTTCTTGGATCATGAGGGTTCAGATTGCACTTGATGCTGCTAGGGGCCTTGAATACATACACGAACACACTAAAACTCATTATGTCCATCGAGATATCAAGACAAGCAACATCTTACTTGATGCTTCTTTCAGAGCAAAGaTTTCAGATTTTGGGTTAGCAAAGCTTGTTGGCAAAACAAACGAGGGAGAAATTAGTATTACCAAAGTTGTTGGTACCTATGGTTATCTCGCTCCAGAATACTTGAGTAATGGTCTTGCGACAACCAAAAGTGATGTCTATGCATTTGGCGTTGTTCTTTTTGAGATTATTTCTGGGAAGGAGGCCATTATTCGAACAGACACAATGACTAAAAATCCTGAAAGACGTTCATTGGCATCTATTATGTTGGTAGCGCTTAGAAACTCGCCTGATTCTATGAGTATGTCAAGCATGAGAGATTATATTGACCCTAATATGATGGATCTGTATCCCCATGATTGTGTATTCAAGATGGCCATACTGGCAAAGCAATGCGTAGATGATGATCCCCTCCTACGACCTGATATGAAACAAGTTGTGATTTCGCTGTCTCAGATCCTTCTATCTTCTGTTGAATGGGAGGCCACCCTAGCTGGGAAGAGTCAAGTATTCAGTGGGCTTGTTCAGGGAAGGTA 2000 0.4115 MILVRKSQLKLLHFLLFLLHLQSLCSYPTPMSCADTTRLCTSFLAFKPQPNQTLAVLQSMFDVLPNDITVEGNGWDYVFIRKNCSCAAGAKKYVSNTTFTVRSNVGYVYDLVMDAYDGLAILPNTTRMAKLGAVISVRLFCGCSTGPWNYLVSYVMRDGDSIGSLASRFGVSMDNIENVNGISNPDNVTVGSLYYVPLDSVPGEPYPLKNDTPSAPVPAPSDDNFSANQSNHKAHVPYRWIIGGLAVGLTLIILSIILYVSLRSSNRFAKARRSHAKDADSKVSHNFHILRNPSFCCGSGRYICGKPVEQKKTDGESSNHQITIPKVSTLGTDVFDVDVDKPVVFTYEEIFSSTDGFSDSNLLGHGTYGSVYYSLLRDQEVAIKRMTATKSKEFMSEMKVLCKVHHTNLVELIGYAASHDELFLIYEYAQKGSLKSHLHDPQNKGHSPLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLVGKTNEGEISITKVVGTYGYLAPEYLSNGLATTKSDVYAFGVVLFEIISGKEAIIRTDTMTKNPERRSLASIMLVALRNSPDSMSMSSMRDYIDPNMMDLYPHDCVFKMAILAKQCVDDDPLLRPDMKQVVISLSQILLSSVEWEATLAGKSQVFSGLVQGR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02353 666 Pfam LysM domain 154 191 IPR018392 -
Bva02g02353 666 PANTHER BNAA06G02020D PROTEIN 31 666 - -
Bva02g02353 666 ProSiteProfiles LysM domain profile. 152 196 IPR018392 -
Bva02g02353 666 SMART serkin_6 357 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02353 666 CDD LysM 152 196 IPR018392 -
Bva02g02353 666 SMART LysM_2 153 197 IPR018392 -
Bva02g02353 666 Gene3D Phosphorylase Kinase; domain 1 331 428 - -
Bva02g02353 666 ProSitePatterns Protein kinases ATP-binding region signature. 363 384 IPR017441 GO:0005524
Bva02g02353 666 SUPERFAMILY LysM domain 152 197 IPR036779 -
Bva02g02353 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Bva02g02353 666 CDD STKc_IRAK 363 641 - -
Bva02g02353 666 Gene3D LysM domain 149 202 IPR036779 -
Bva02g02353 666 Pfam Protein tyrosine and serine/threonine kinase 361 636 IPR001245 GO:0004672|GO:0006468
Bva02g02353 666 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 31 666 IPR044812 GO:0019199|GO:0045087
Bva02g02353 666 ProSiteProfiles Protein kinase domain profile. 357 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02353 666 SUPERFAMILY Protein kinase-like (PK-like) 338 638 IPR011009 -
Bva02g02353 666 Gene3D Transferase(Phosphotransferase) domain 1 430 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02353 Bva-Chr2 23068431 23073965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02353 30 666 Receptor kinase-like Gene Family AT1G51940 67.647 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva02g02353 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02353 - - gmx:100796989 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02188 08 14363982 14368175 Bva02g02353 02 23068431 23073965 BWGD
Bva02g02353 02 23068431 23073965 Bva02g02353 02 23068431 23073965 ECH