Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02352 ATGGATACAAGGTCTCAGTTGCTAGATTTAATCCCAAAAGACAGAGAGTGGCTCATGAACAGAGATGGAAGAAGCCAGAAGTCCTCAGAGGAGAGGGAGCTTGAGCTTAGGCTTGGGCCCCCAGGTGAAGACTGGTCCACAAATGAtggtaaaagagaaaaggaagagtctcttctttctcttggtTGCTTCACAACCCAGAAGAACACCAACAATGGGTGCCAAACTCCGAAAATTTCTACCTCTGAAAACCCAGCTGGGGCTATTTTGTCATCTCCATGGGGTCCAAATCAGCATCAGGGAAAAGCGTCACAGTTTGTTCAATTCCAAACTAGTACACATGTGATGGGTAAGGAAGCGTCACAAGCAGCAACCTGCTGCCTTAAAGTGGTAGAATTGCAGAATGCAGAGAAGAAACCATTTTCGCCATCTTCTGCAAATACAGCTGTGCCTAACAGCTCTCAGAAAAGAACTGCTCCTGGTCCAGTTGTGGGTTGGCCTCCAATCCGTTCATTTCGGAAGAACCGAGCAACCAGCAGCACTTCTAAACCTTCTTCTGAGTCTAATCCGCAGCATGCTGTTCCAGACAAGGTTGCTGGGAAAAAACCTACTGAAAACTCCACTAGAGGCCTTTTTGTGAAGATTAACATGGATGGAGTCCCGATTGGTAGAAAAGTGGATCTCAATGCTTACGACAGCTATGAAAAACTCTCTTCTGCTGTTGACGAACTCTTCAGAGGCCTCCTTGCAGCTCAAAGAGATTCCTGTGCTGTTGGAATTCAGAGCAAGCAAGGAGAAGATAAAGCGATTACAGGCTTATTGGATGGAAGTGGGGAATATACTCTTGTTTATGAGGATAACGAAGGAGACAGGATGCTCGTTGGGGATGTGCCATGGCACATGTTCGTGTCAACAGTGAAGAGGCTGCGCGTGTTGAAGAGTTCTGAGCTTTCTGCATTGACCCtTGGCAGTAAGCAAGAGAAGATTGCAGTTAACTCGCACTG 1004 0.4502 MDTRSQLLDLIPKDREWLMNRDGRSQKSSEERELELRLGPPGEDWSTNDGKREKEESLLSLGCFTTQKNTNNGCQTPKISTSENPAGAILSSPWGPNQHQGKASQFVQFQTSTHVMGKEASQAATCCLKVVELQNAEKKPFSPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNRATSSTSKPSSESNPQHAVPDKVAGKKPTENSTRGLFVKINMDGVPIGRKVDLNAYDSYEKLSSAVDELFRGLLAAQRDSCAVGIQSKQGEDKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSALTLGSKQEKIAVNSH 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02352 334 MobiDBLite consensus disorder prediction 173 192 - -
Bva02g02352 334 MobiDBLite consensus disorder prediction 138 159 - -
Bva02g02352 334 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 328 IPR003311 GO:0005634|GO:0006355
Bva02g02352 334 MobiDBLite consensus disorder prediction 19 39 - -
Bva02g02352 334 PANTHER AUXIN-RESPONSIVE PROTEIN IAA26 7 328 - -
Bva02g02352 334 SUPERFAMILY CAD & PB1 domains 204 311 - -
Bva02g02352 334 MobiDBLite consensus disorder prediction 138 205 - -
Bva02g02352 334 Gene3D - 204 326 - -
Bva02g02352 334 MobiDBLite consensus disorder prediction 19 52 - -
Bva02g02352 334 Pfam AUX/IAA family 33 320 IPR033389 -
Bva02g02352 334 ProSiteProfiles PB1 domain profile. 210 314 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02352 Bva-Chr2 23055636 23059291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02352 145 325 B3 DNA Binding Superfamily AT4G23980 29.508 5.25e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva02g02352 AUX_IAA 2.5e-72 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02352 K14484 - qsu:111988286 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02187 08 14351764 14355282 Bva02g02352 02 23055636 23059291 BWGD
Bva08g02187 08 14351764 14355282 Bva02g02352 02 23055636 23059291 ECH
Bva02g02352 02 23055636 23059291 Bva02g02352 02 23055636 23059291 ECH