Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02349 ATGGGTAAGGCTACGAGATGGTTGAAGGGCCTGCtggggatgaagaaagagaaagagtcCAGTGTTAGTTCAGGGTCACTGGGTTCAGACAAGAAGGTGGAGAAAAAAAGGTGGAGTTTTGCTAAGTCAGGGAAGGATCCTGATGTGGATCAAAGTCCTGTGAGCATTGCAACCGGTGTTCCAGCCACTGATAATGCTTGGCTAAGATCCTATATTACTGACACAGAGAAAGAGCAGAACAAGCATGCAATTGCGGTGGCAGCGGCCGCTGATGCTGCTGTCGCCGCCGCGCAGGCTGCTGTGGCTGTTGTGAGGCTAACAAGCCATGGCAGAGGTACATTATTCAGTGGAGGCAGAGAAAGCTGGGCTGCCGAGAGAATTCAAACGGTCTTCAGAGGTTTCTTGGCGCGGAAAGCCCTCAGAGCACTGAAAGGATTGGTGAAGATACAAGCTCTTGTCAGAGGATTTCTAGTTAGAAAGAGGGCTGCTGCAACTCTTCACAGCATGCAAGCTCTAATTCGAGCACAGGCAGCTGTTCGATCACAGCGCGCTCGTCGTTCCATCAGCAAAGAGAACAGATTTCAACCCGAAATTCGTGGTAGAAGATCTCTGGAGCGGTTCGATGAAACAAGAAGTGAATTCCATAGTAAAAGACTCTCCTCGTGTCATGAACCTTGCTTCAATGGATTTGAATCGGAAAGCccaaaaattgttgaaattgaCACTTACAGGACCAAATCAAGGTCCAGGCGCATTGCCCCTGCGTTTTCCGAATGTGAAGAGCTGCCTTATCAGACAATCTCCTCTCCTTTGCCTTGTCCTGTCCCAGGCCGAATCTCTGTTCCTGATTGCAGGCAATTTCAAGATTTCGAATGGTACTTCAATGATGACGAATGCAAATTCGCCACTGCTCAGAACACTCCTCGCTTTGCGAGGTCTAACGCCCCAGCTACGCCGACCAAGAGCGTTTGTGGAGACACCTTCTTCCGATCATCATACTCCAATTTCCCAAACTACATGGCTAATACACAGTCATTCAAGGCAAAACTAAGGTCTCTCAGTGCCCCAAAGCAAAGGCCAGAATCAAAGAAGAAGCTTTCTCTCGATGAAATAATGGCAGCAAGGAACAGCATAAGCAGCGTTAGAATGCAGAGGTCTTCATTTTCTCAGGTTCAGGAGTCCTTGAATTTTTG 1193 0.4677 MGKATRWLKGLLGMKKEKESSVSSGSLGSDKKVEKKRWSFAKSGKDPDVDQSPVSIATGVPATDNAWLRSYITDTEKEQNKHAIAVAAAADAAVAAAQAAVAVVRLTSHGRGTLFSGGRESWAAERIQTVFRGFLARKALRALKGLVKIQALVRGFLVRKRAAATLHSMQALIRAQAAVRSQRARRSISKENRFQPEIRGRRSLERFDETRSEFHSKRLSSCHEPCFNGFESESPKIVEIDTYRTKSRSRRIAPAFSECEELPYQTISSPLPCPVPGRISVPDCRQFQDFEWYFNDDECKFATAQNTPRFARSNAPATPTKSVCGDTFFRSSYSNFPNYMANTQSFKAKLRSLSAPKQRPESKKKLSLDEIMAARNSISSVRMQRSSFSQVQESLNF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02349 397 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
Bva02g02349 397 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Bva02g02349 397 ProSiteProfiles IQ motif profile. 168 197 IPR000048 GO:0005515
Bva02g02349 397 MobiDBLite consensus disorder prediction 15 55 - -
Bva02g02349 397 SMART iq_5 142 163 IPR000048 GO:0005515
Bva02g02349 397 SMART iq_5 119 141 IPR000048 GO:0005515
Bva02g02349 397 Gene3D - 118 171 - -
Bva02g02349 397 PANTHER PROTEIN IQ-DOMAIN 14-LIKE 1 389 - -
Bva02g02349 397 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515
Bva02g02349 397 Pfam IQ calmodulin-binding motif 126 141 IPR000048 GO:0005515
Bva02g02349 397 PANTHER IQ-DOMAIN 5-RELATED 1 389 - -
Bva02g02349 397 MobiDBLite consensus disorder prediction 29 44 - -
Bva02g02349 397 Pfam Protein of unknown function (DUF4005) 304 383 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02349 Bva-Chr2 23035200 23038255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02349 1 383 IQD Protein Family AT3G16490 52.346 1.79e-111 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02349 - - gmx:100797686 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02186 08 14342680 14344778 Bva02g02349 02 23035200 23038255 BWGD
Bva02g02349 02 23035200 23038255 Bva02g02349 02 23035200 23038255 ECH