Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02348 ATGTCGTGGCAAACCTACGTAGATGAACACCTCATGTGCGATATTGAAGGCCATCATCTCACCTCCGCTGCCATCATCGGCCACGACGGTAGCGTGTGGGCCCAGAGCTCAACCTTCCCTCAGTTTAAGCCAGATGAAGTGGCTGCCATCATGAAAGATTTTGACGAACCTGGCTCCCTTGCTCCAACTGGGTTACACCTTGGTGGTGCCAAGTACATGGTCATCCAAGGAGAAGCCGGAGCTGTTATCCGTGGGAAGAAGGGTGCTGGCGGGATTACAGTTAAGAAAACCGGCCAAGCTCTTATATTTGGTATCTATGATGAACCTGTGACCCCAGGACAGTGCAACATGGTTGTTGAGAGGTTGGGAGATTATCTTGTCGATCAGGGACTCTA 395 0.5114 MSWQTYVDEHLMCDIEGHHLTSAAIIGHDGSVWAQSSTFPQFKPDEVAAIMKDFDEPGSLAPTGLHLGGAKYMVIQGEAGAVIRGKKGAGGITVKKTGQALIFGIYDEPVTPGQCNMVVERLGDYLVDQGL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02348 131 PRINTS Plant profilin signature 104 117 IPR005455 GO:0003779
Bva02g02348 131 PRINTS Plant profilin signature 71 80 IPR005455 GO:0003779
Bva02g02348 131 PRINTS Plant profilin signature 117 130 IPR005455 GO:0003779
Bva02g02348 131 PRINTS Plant profilin signature 84 99 IPR005455 GO:0003779
Bva02g02348 131 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Bva02g02348 131 PRINTS Plant profilin signature 52 66 IPR005455 GO:0003779
Bva02g02348 131 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Bva02g02348 131 SMART prof_2 1 131 IPR005455 GO:0003779
Bva02g02348 131 Pfam Profilin 1 130 IPR005455 GO:0003779
Bva02g02348 131 Gene3D Dynein light chain 2a, cytoplasmic 1 131 - -
Bva02g02348 131 PANTHER PROFILIN-A 1 131 - -
Bva02g02348 131 CDD PROF 2 130 IPR005455 GO:0003779
Bva02g02348 131 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Bva02g02348 131 PRINTS Profilin signature 64 78 IPR005455 GO:0003779
Bva02g02348 131 PRINTS Profilin signature 113 130 IPR005455 GO:0003779
Bva02g02348 131 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Bva02g02348 131 PRINTS Profilin signature 100 113 IPR005455 GO:0003779
Bva02g02348 131 PRINTS Profilin signature 40 60 IPR005455 GO:0003779
Bva02g02348 131 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Bva02g02348 131 PANTHER PROFILIN 1 131 IPR005455 GO:0003779
Bva02g02348 131 SUPERFAMILY Profilin (actin-binding protein) 2 130 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02348 Bva-Chr2 23029201 23030829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02348 1 131 Cytoskeleton Gene Families AT4G29340 80.597 1.97e-79 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02348 K05759 - zju:107435040 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02185 08 14339234 14340024 Bva02g02348 02 23029201 23030829 ECH
Bva03g00528 03 3065620 3067883 Bva02g02348 02 23029201 23030829 ECH
Bva04g00690 04 4572800 4574878 Bva02g02348 02 23029201 23030829 ECH
Bva02g02348 02 23029201 23030829 Bva02g02348 02 23029201 23030829 ECH