Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02335 ATGACAATATCAAAGAGTTTCCTCATTGCTTTACTACTTGGTTTAGCTGTTGCAGCTCTGATACAAGCTCAGGATCAATCAGGCTTCATCAGCATAGATTGTGGGCTAGCTGCAGGTTCTAGCTATTCTGAACATAAAACGGGCCTGATTTACATATCAGATGCCAAATTCACTAACAGTGGTGTACCACAGAATATAGAACCTCAAATCAGAAATGACTATCAAGAACAACTGGGCTCCTTGAGAAGCTTTCCCCAAGGAATAAGGAACtgttacaaaataaacattactAGTGGTTCAAGGTATCTGATCCGAGCTACTTTCCTTTATGGAAATTACGATGGCCAGAATGAGTTACCACAATTTGATCTTCTTCTGGGGGCTAACAAGTGGGAAACAGTGACAATAAACAATGCTTCCATCAGTCAAAATTTTGAGCTCATACACGTTCCCACATTCGATTATATACAAATCTGTTTGGCTAACACAGGCCAAGGCACTCCATTTATTTCTGCTATAGAACTCAGGCCTCTTCCTAATGATACTTATGTCACTCAATTTGGATCATTGTCCCGCTATTTGCGTTTGGACTTAGGCTCAACTAGCAACCTGTCATACAGGAATTTATCTTCAAGTGGGTTAAAAGGGAGTATAGATGTTTCCATATCCAGGCTCACTATGTTGCAGAATCTGGATTTATCAAACAATAGCTTAAATGGCCAAGTACCAGATTTTCTATCTCAATTGCAATCTTTAAGGGTTCTAAATTTGGCGAATAACAACCTTACGGGTCCAATTCCCTCTGAACTGcttcaaaaatcaaacaaaggcACACTATCACTGAGTGTGGGCCAAAATCCTTATCTATGTGAATCTCCACCATGCAACAACAACGACAACAACAATAACgacaacaaaaagaagagtaaTGTCGTGGTTCCTGTAGTAGCATCAGTTGGAGGGGTCTTGATCCTTCTTGTAGCTGTCGGAGCTTTTTTCTGGACACGCAAGCGAAAACCACCACCAAAAACCGTGAAGATGCTTTCTGCATCATCAGTTCAAGGTTATCAACAATTTCAAGCAGAGGTCCAACTTCTGCTGAGAGTTCATCATAGAAACCTAACATCCCTTATTGGGTATTGCAATGAAGAATCCAACAAGGGGCTCATCTACGAGTACATGGCCAATGGAAACTTACAAGGGCATATTTCAGGTAGAGGCAGCAACGCTAAGTTCATGACTTGGGGAGACAGACTCCACGCAGCATTGGATGCAGCCCAAGGATTAGAGTATTTGCATAATGGTTGTAAGCCACCTATAATCCATAGAGATGTAAAATCTACAAACATCTTGTTGAATGAAAACTTCCAAGCAAAGTTATCTGATTTTGGCTTATCTAAAGTTATCCCAACCGAAGATGCGAGTCACGTGTCAACAGTTGTTGCTGGTACTCCTGGTTATCTTGACCCTGAATACTACATAACAAACAGATTAACAGAGAAAagtgatgtttatagttttgggGTTGTTATTCTAGAGATAATCACAGGCCAAGCAGTAATAtcaaaaaatcatgaaatgaCTCACGTAAGCCAAAGGGTTAGCTCAATGGTTGCCAAAGGGGATATAAAGAACATTGTTGACCCGAAGTTACAAGGAGATTTTGACACTAACTCTGTGTGGAAAGTAGTTGAAATAGCAATGGCTTGTGTGTCTCCAAATGCCAGTGCAAGGCCAACCATGAGTGATGTAGTGGCAGAGCTAAGGGAGTGTTTGGCAACGGAGTTAGctggaagaaaacaaagtgatAGTAATGTTAATACAGGAGATTCGCTTGATGTGATGGCAAGTCTCAGAACAGAATTTACTCCCTTTGCCAGGTA 1883 0.3882 MTISKSFLIALLLGLAVAALIQAQDQSGFISIDCGLAAGSSYSEHKTGLIYISDAKFTNSGVPQNIEPQIRNDYQEQLGSLRSFPQGIRNCYKINITSGSRYLIRATFLYGNYDGQNELPQFDLLLGANKWETVTINNASISQNFELIHVPTFDYIQICLANTGQGTPFISAIELRPLPNDTYVTQFGSLSRYLRLDLGSTSNLSYRNLSSSGLKGSIDVSISRLTMLQNLDLSNNSLNGQVPDFLSQLQSLRVLNLANNNLTGPIPSELLQKSNKGTLSLSVGQNPYLCESPPCNNNDNNNNDNKKKSNVVVPVVASVGGVLILLVAVGAFFWTRKRKPPPKTVKMLSASSVQGYQQFQAEVQLLLRVHHRNLTSLIGYCNEESNKGLIYEYMANGNLQGHISGRGSNAKFMTWGDRLHAALDAAQGLEYLHNGCKPPIIHRDVKSTNILLNENFQAKLSDFGLSKVIPTEDASHVSTVVAGTPGYLDPEYYITNRLTEKSDVYSFGVVILEIITGQAVISKNHEMTHVSQRVSSMVAKGDIKNIVDPKLQGDFDTNSVWKVVEIAMACVSPNASARPTMSDVVAELRECLATELAGRKQSDSNVNTGDSLDVMASLRTEFTPFAR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02335 627 Gene3D Ribonuclease Inhibitor 127 317 IPR032675 -
Bva02g02335 627 PANTHER OS07G0107800 PROTEIN-RELATED 11 207 - -
Bva02g02335 627 ProSiteProfiles Leucine-rich repeat profile. 251 272 IPR001611 GO:0005515
Bva02g02335 627 SMART serkin_6 321 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02335 627 Pfam Protein tyrosine and serine/threonine kinase 344 588 IPR001245 GO:0004672|GO:0006468
Bva02g02335 627 PANTHER PUTATIVE-RELATED 344 627 - -
Bva02g02335 627 PANTHER PUTATIVE-RELATED 11 207 - -
Bva02g02335 627 Gene3D Phosphorylase Kinase; domain 1 335 394 - -
Bva02g02335 627 ProSiteProfiles Protein kinase domain profile. 321 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02335 627 PANTHER OS07G0107800 PROTEIN-RELATED 344 627 - -
Bva02g02335 627 Gene3D Transferase(Phosphotransferase) domain 1 395 613 - -
Bva02g02335 627 SUPERFAMILY Protein kinase-like (PK-like) 344 586 IPR011009 -
Bva02g02335 627 Pfam Malectin-like domain 32 206 IPR024788 -
Bva02g02335 627 SUPERFAMILY L domain-like 188 282 - -
Bva02g02335 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Bva02g02335 627 PANTHER PUTATIVE-RELATED 208 339 - -
Bva02g02335 627 PANTHER OS07G0107800 PROTEIN-RELATED 208 339 - -
Bva02g02335 627 PRINTS Leucine-rich repeat signature 249 262 - -
Bva02g02335 627 PRINTS Leucine-rich repeat signature 228 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02335 Bva-Chr2 22965211 22968791 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02335 208 627 Receptor kinase-like Gene Family AT1G51850 47.531 6.58e-140 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva02g02335 PK_Tyr_Ser-Thr 2.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02335 - - cic:CICLE_v10027271mg 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02335 02 22965211 22968791 Bva02g02335 02 22965211 22968791 ECH