Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02333 ATGCAAAAAATGATGGGAATTTTGCAGACATCTGTTTATGCATTGCTTGGTGTTTTAACCATTGTGCTTCTGGTTCAAGCTCAAGATCAATCAGGATTCATCAGCATAGATTGTGGGCTGCCCGCAAATTCGAGCTACAGTGAGGAAACAACAGGCATAAATTACATTTCAGATGCTAAGTACATTAGCACTGGTGAAAGTAAGACTGTGCCAACTGAATTTAGGGCTACCAAACAGCAGCAGTTATGGTATTTGAGGAGATTTCCTAGTGGAACAAGGAACTGCTACAAAATAAAGGTCACAAGTGGCACTAAATATCTCATAAGAGCTAGTTTCTTCTATGGAAATTATGATGATCAAAATGAATTACCAGAATTTGCTCTTCATCTTGGAGCTAACGTGTGGGAAACAGTGAAGTTCACCAATGCATCTATTAGCATAAACTATGAGATCATACACATTCCCCCACTTGACAATGTACAAATCTGTTTGGTTAACACAGGCTCTGGGATACCATTTATTTCAGCTATAGAATtgaggactttgaaaaatactACTTATATTACTCAGTCTGGATCATTGTCCCGTTTTCTGCGCGTAGATATGGGAAACAGCAACTTAACATACAGGttcaaaaatgatatttacgATCGCTTCTGGTTACCTATTTTGTTCAACGGTTGGATGGATTTAAGCATGACACTTAGCCCGAATTCTCTAAGTCAGAATGATTATCAACCACCAGCAATTGTCATGAGCACTGCAGCTACACCAGTAAATATCAGTGGCTCTTTTGACTTCTACTGGGATCCAGACAATGTAAATGACCAGTTCTACATCTATATGCACTTCACTGAGGTTCAAGTGATACCAGACAATGAAACTAGAGCATTCAATATCTCCTTGAATGGTGACTATTGGTATGGTCCATTGTCACCTCTTTACCAGGTGACAACCACCATATTCAGTTCAAAACCCTTAACTGGGTCAACGCGGTATCTATTTTCGCTTTACCAGAGTTGGAATTCCACCCTTCCACCTACAATCAATGCCGTTGAGGTTTATCAAGTGAAAGATTTCTCACAATCAGACACTGACCAAGATGATGTTGATGCAATCACAAACATCAAGTCAACTTATGGACTGACAAGAAATTGGCAAGGAGATCCGTGTGCTCCTGTAGCATACATGTGGCAAGGTCTAAATTGTAGTGTTTCTGGCACTGACCCTTCAAGAATCATATCCCTGAATTTATCTTCAAGTGGACTCACAGGGGAGATACCTTTAGACATCTCCAAGCTCACCATGTTACAGTCCTTGGATCTATCAAACAATAGCTTAAGTGGGTCAATCCCTGATTTTCTGACAAAATTGCCATCGATGACAGTCTTAAACTTGGCAAAGAACAACCTCAGCGGTTCAATTCCCAGTGAACTTCTTGATAAATCAAGGGCAGGTTCACTATCATTGAGCGTGGAGCAAAATCCGATTCTATGTGGAACCACTTCATGCAACCAGAATGGGAACCagacagagaaaaagaagaaaaacaacataGTTATTCCTATAGTAGCAGCAATTGGTGGGGCTCTTGTCTTGCTACTAATTATCGGTGTAGTTGTATGTATTTTCTGCGGCATTGGAAAGAGGAAACCACCAGCTGCTGGTAAGGTTGATATGGAGCCAAGCACTCCAACTGCATCTTCATTCGAAATCAAGAATCAACAATATTCATACACCGATCTTGTCAAGATGACCAACAACTTTGATAGGGTTCTTGGTAAAGGTGGATTTGGAACAGTTTACCATGGCTTCATTGATGACATACAAGTAGCTGTAAAGATACTTTCCGCATCATCAGTTCAAGGATATCAGCAATTTGTAGCAGAGGTTAAACTTCTCATGAGAGTTCATCACAGAAACCTGACTTCCCTTATTGGGTATtgcaatgaagaaaacaacattGGTCTCATCTATGAATACATGGCAAATGGAAACTTAGATGAACTTCTTTCAGGTAGAAACAGCGGGACAAAGTTCCTGACTTGGGAAGACAGACTCCGAATAGCAATGGATTCAGCTCAAGGTTTGGAATATCTACATAATGGTTGCAAGCCACCCATAATCCATAGAGATGTCAAAACTACAAACATCTTATTGACTGAAACCTTGCATGCAAAATTGGCTGATTTTGGACTGTCCAAGAGTTTCCCAACTGATGGAGGCACGCATGTGTCCACTGTTGTTGCTGGAACTCCTGGTTATCTAGATCCTGAGTACTACATATCAAACAGGTTGACAGagaaaagtgatatatatagcTTTGGAGTAGTACTCTTAGAGATAATTACAGGTCAACCGGCAATCACAAGAACACATGAAAAGACTCACATAAGTCAATTTGTTGGATCCATGCTTGACAAAGGGGATATCAAGAATGTTGTTGACCCAAAGTTGAATGGAGAATTCGACACTAGCTCTGTTTGGAAAGCTGTTGAAATAGCAATGGCTTGtctatcccatgctaatgctAAAAGACCAAACATGAGTGATGTAGTGGCAGAGATAAAGGATTGTTTGGCTGCAGAGCTAGCACGAAAAAGATCTCACCTTGAAAATGAGAACAAAGATTCCATTGAACTGGTCTCCTTGAATTTGACTACTGAACTTAATCCCGTGGCTAGGTA 2687 0.3882 MQKMMGILQTSVYALLGVLTIVLLVQAQDQSGFISIDCGLPANSSYSEETTGINYISDAKYISTGESKTVPTEFRATKQQQLWYLRRFPSGTRNCYKIKVTSGTKYLIRASFFYGNYDDQNELPEFALHLGANVWETVKFTNASISINYEIIHIPPLDNVQICLVNTGSGIPFISAIELRTLKNTTYITQSGSLSRFLRVDMGNSNLTYRFKNDIYDRFWLPILFNGWMDLSMTLSPNSLSQNDYQPPAIVMSTAATPVNISGSFDFYWDPDNVNDQFYIYMHFTEVQVIPDNETRAFNISLNGDYWYGPLSPLYQVTTTIFSSKPLTGSTRYLFSLYQSWNSTLPPTINAVEVYQVKDFSQSDTDQDDVDAITNIKSTYGLTRNWQGDPCAPVAYMWQGLNCSVSGTDPSRIISLNLSSSGLTGEIPLDISKLTMLQSLDLSNNSLSGSIPDFLTKLPSMTVLNLAKNNLSGSIPSELLDKSRAGSLSLSVEQNPILCGTTSCNQNGNQTEKKKKNNIVIPIVAAIGGALVLLLIIGVVVCIFCGIGKRKPPAAGKVDMEPSTPTASSFEIKNQQYSYTDLVKMTNNFDRVLGKGGFGTVYHGFIDDIQVAVKILSASSVQGYQQFVAEVKLLMRVHHRNLTSLIGYCNEENNIGLIYEYMANGNLDELLSGRNSGTKFLTWEDRLRIAMDSAQGLEYLHNGCKPPIIHRDVKTTNILLTETLHAKLADFGLSKSFPTDGGTHVSTVVAGTPGYLDPEYYISNRLTEKSDIYSFGVVLLEIITGQPAITRTHEKTHISQFVGSMLDKGDIKNVVDPKLNGEFDTSSVWKAVEIAMACLSHANAKRPNMSDVVAEIKDCLAAELARKRSHLENENKDSIELVSLNLTTELNPVAR 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02333 895 ProSitePatterns Protein kinases ATP-binding region signature. 593 614 IPR017441 GO:0005524
Bva02g02333 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 708 720 IPR008271 GO:0004672|GO:0006468
Bva02g02333 895 SMART serkin_6 587 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02333 895 Gene3D Ribonuclease Inhibitor 370 492 IPR032675 -
Bva02g02333 895 ProSiteProfiles Protein kinase domain profile. 587 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva02g02333 895 SUPERFAMILY Protein kinase-like (PK-like) 566 854 IPR011009 -
Bva02g02333 895 Coils Coil 861 881 - -
Bva02g02333 895 Pfam Protein tyrosine and serine/threonine kinase 589 855 IPR001245 GO:0004672|GO:0006468
Bva02g02333 895 PRINTS Leucine-rich repeat signature 437 450 - -
Bva02g02333 895 PRINTS Leucine-rich repeat signature 458 471 - -
Bva02g02333 895 Pfam Leucine Rich repeats (2 copies) 435 475 IPR025875 -
Bva02g02333 895 Pfam Malectin-like domain 36 357 IPR024788 -
Bva02g02333 895 PANTHER PUTATIVE-RELATED 16 895 - -
Bva02g02333 895 SUPERFAMILY L domain-like 368 483 - -
Bva02g02333 895 Gene3D Phosphorylase Kinase; domain 1 574 661 - -
Bva02g02333 895 ProSiteProfiles Leucine-rich repeat profile. 436 459 IPR001611 GO:0005515
Bva02g02333 895 Gene3D Transferase(Phosphotransferase) domain 1 662 883 - -
Bva02g02333 895 PANTHER OS07G0107800 PROTEIN-RELATED 16 895 - -
Bva02g02333 895 CDD STKc_IRAK 593 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02333 Bva-Chr2 22955123 22959332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02333 14 895 Receptor kinase-like Gene Family AT1G51800 50.333 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva02g02333 Malectin_like 1.5e-110 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02333 - - aprc:113849011 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02333 02 22955123 22959332 Bva02g02333 02 22955123 22959332 ECH