Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02311 atgcaAGACCCAACCTTCCACCCCATGAAACCCCACTTTCCTGAACAAGAACAACTTAAATGCCCACGCTGTGACTCCACAAACACCAAATTCTGCTACTACAACAACTACAACCTCTCACAGCCCCGCCATTTCTGCAAGAACTGCAGAAGGTATTGGACAAAAGGAGGTGCTTTGCGCAATATCCCTGTGGGCGGTGGAAGTAGAAAGAACGCAAAGCGATCTTCCAACACCAAACGCtcgtcatcttcttcttccccttctGTTTCGTCTTGCTCTGCCACCCAAACCAAAGTTCCTGAGGAGGATACGGCCCGGGTTTATTCTAACCCGATAGATCAAGAGAGGCCCGTGCTAAACATTGGTGGGAGCTTCAGTTCGCTTCTGGCATCAACTGGGAATTTGGGTAATCTATTGGAGGGTCTGAATTCAAATGGGTCTAATGTAAAAATGGTTCATTTCGGTGAATTTGGGGAGAATGCGAGTTCTGGTCCATTGATGAACTCGGACTCGGGTAGAAATCCTGGGTTGGAGATGCAGAGTAATGGGGGTTCGGAGGGCTTTCTGGGCTTGCAGAATGGTGGTTCGAGCTGTTGGAATGGTGGCAATGGGTGGTCAGACCTTGCAATCTATACTCCAAGTTCAAGCTTTCAGTA 656 0.4649 MQDPTFHPMKPHFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRSSNTKRSSSSSSPSVSSCSATQTKVPEEDTARVYSNPIDQERPVLNIGGSFSSLLASTGNLGNLLEGLNSNGSNVKMVHFGEFGENASSGPLMNSDSGRNPGLEMQSNGGSEGFLGLQNGGSSCWNGGNGWSDLAIYTPSSSFQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02311 218 ProSitePatterns Zinc finger Dof-type signature. 21 57 IPR003851 GO:0003677|GO:0006355
Bva02g02311 218 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 3 218 IPR045174 GO:0003700|GO:0006355
Bva02g02311 218 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 3 218 - -
Bva02g02311 218 ProSiteProfiles Zinc finger Dof-type profile. 19 73 IPR003851 GO:0003677|GO:0006355
Bva02g02311 218 MobiDBLite consensus disorder prediction 77 103 - -
Bva02g02311 218 Pfam Dof domain, zinc finger 17 73 IPR003851 GO:0003677|GO:0006355
Bva02g02311 218 MobiDBLite consensus disorder prediction 60 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02311 Bva-Chr2 22842723 22844745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02311 10 139 C2C2-Dof Transcription Factor Family AT1G51700 56.643 6.81e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva02g02311 zf-Dof 2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02311 - - gmx:100798927 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02160 08 14228146 14229530 Bva02g02311 02 22842723 22844745 BWGD
Bva02g02311 02 22842723 22844745 Bva02g02311 02 22842723 22844745 ECH