Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02305 ATGGCATCCTTTTGGAGCTCACACGGTGGATTTTGGTGGATTTGTGAAGAAGAATCTAATATGGCTTCTTTCTGCATCCAAAGAACCATAATAGATGTGAGCTTCCTACTTCTCCTTTGTGCCTTCAGAAACCATGGTTACTTTGTTTCTGAACATTACCCAAATGACACAATGGTTGAGCCTTTGTTAGATGAAAAGGTCAGAAAGAGGAGAACAGAATTAAGCCAGGCTAATTTTCTTAGCGAACTGACCCTTTCTTGGATTAATCCTTTACTCTCTTTGGGTTACTCAAAGCCACTAGCTCTTGAAGACATACCTCCTTTAGATTCTAAAGACAAAGTTGACTTATCCTACCAAAAATTTGCTGATGAATGGGAATCCTTATTAAGAGGAAGCAGCTCAAACAGTGCCGAGAACTTGGTACTTCGGGCCATGGCAAGAGTTTTCTTcagagaaaatatattcatagcAATCTGTGCATTGCTTAGGTCGATTTGTGGAGCTATTTCTCCTCTGATACTCTTTGCCTTTGTAAGTTATTCGAGTGGCAATGAAGACAGCATACACGAAGGTCTTGTTATATTAGGGTGCCTAATTCTTGCTAAATTGGTAGAGACTTTGTGTCAAAGGTACTGGTACTTTAACTCAAGGAGGTCAGGAATGAGAATGAGATCAGCTTTAATGGTGGCAGTCTATGGAAAGCTGTTAAAGCTTTCAAGTTTGGGAAGGACAAGGCACTCAACTGGGGAGATTGTGAATTACATAGCAGTTGATGCCTATAGGATGGGAGAGTTCTTATGGTGGTTCCATTCAGGATGGAGTCTTGCATTGCAACTTTTCTTAGCTATTGCTGTCCTTTTCTGGGTTGTGGGTCTTGGAGCTCTTCCTGGTCTTgtccttcttttcttgtgtggAATCTTTAATGTTCCATTTGCACAGAAGCTAAAAAAGTGTCAGTCAGAAATCCTGAAATCCCAAGATGAGAGACTTAGGTCAACTTCAGAGATCCTGAACAATATGAAACTCATCAAGTTACAATCGTGGGAGGATGAATTTAAGAACTTGGTCGAATCACTTCGTGCTAGAGAGTTCCAATGGTTGGGTGAGACGCAGTATACAAAGGTTTATAGCTCAATATTGTTCTTCATTTCTCCAACCATTATTTGTGCCGTTATTCTCGTGGGGTGCACCCTTTTTGGAAGTGCCCCTTTAACTGCTGCCACTGTCTTCACAGTTATTGCAACATTGAGGACCATGGGCGAACCTGTCAAATTATTACCAGAGGCTCTTTCTgccatcatccaagttaaggTTTCATTTGACAGGCTTAATACCTTTCTCCTTGATGATGAGATAAAGGGTAACGAAACGAGGAGAACTTTGATACCAAATTCAGATAGAAGCATTGAAATAACGTCAGCTAATTTCAGTTGGGATTCAGAATCATTTACCCCAACTTTGAAAGACATCAATCTAGACATAAAAAGAGGTCAAAAAGTTGCAGTTTGTGGGCCTGTCGGAGCTGGGAAGTCATCTCTCTTGCATGCTATCCTTGGAGAGATGCCTCGTATCTCAGGAACTGTTACCGCACAAGGCACAGTGGCCTAtgtttctcaaacttcttggaTCCAAAGTGGGACAATTCGTGACAACATACTCTATGGCAAGTCAATGGAAGAAACTAGATATAAGGAGGCCATCAAAGCATGTGCTTTGGATAAAGATATTAGTGGATTTAGTCATGGTGATCTTACAGAAATAGGTCAGAGAGGGCTTAACTTGAGTGGAGGACAGAAGCAGAGGATTCAACTTGCACGAGCTGTCTATAATGATGCTGATATATATCTCCTTGACGATCCATTCAGTGCAGTAGATGCACATACTGCTGCAGTTCTATTCCATGAATGTGTCATGAGTGCTCTCAAAGAGAAAACAGTCATCCTGGTGACTCATCAAGTGGAGTTTCTTTCGgaagttgataaaattttgGTCCTTGAGGGGGGATGTATTGCTCAAGGTGGAAGCTATGAGGATCTAATGACAACTGGGACAAAGTTTGAACAACTTCTGAATGCTCATAGAGATGCTATAGCAGTACTGGATACACTTCATGAAAACCAGGAGGAATCTCCAGAAGTAGATACAGTTAAACTAGTGGAGCCTAATGGATGTGAGCAGGACAATAAAAACTGCGACAGAGAAAGTTGCGAGGCAAGTTTCCAAAGGGGGCAACTTACGCAAgaagaacaaagagagatgGGAGATGCTGGATGGAAACCATTCCTGGATTATGTTTTTATCTCTAAGGGATTGCTGCCTCTGCTTTTAAGCTCAACAGCTCTgataggttttattttttttctggctTCGTCTTCTTATTGGCTTGCTTTAGCCATTCAGATCCCCAAGATCAGTGCCGGAATGCTAGTTGGAGTTTACTCTGGGTTATCAATGCTTAgtacaatatttatttacttaaggTCTTACTGGATAGCTCTTCTTGGATTAAAGGCTTCTAAGGCCTTCTTCTGTGGTTTCACTCATGCTATTTTCAATGCTCCCATGTCCTTCTTTGACTCCACTCCTGTTGGACGGATTTTGACCCGGGCTTCATCAGATATGGGTACTTTGGATGTTGACATACCTTTCGCCATAATCTATGTTGCCCATACTGTGGTTGAATTTCTAACAGGAATTGGGATTATGGCTTCAGTCACATGGCAAGTTCTCATAATTGGCATACTAGTTATGATAGCTGCAAAATACATTAAGGACTACTACCAAGCCTCTGCGAGAGAACTAGTAAGGATTAATGGAACAACAAAAGCTCCAGTTGTGAATTATGCTGCAGAGACATCTGCAGGAGTGGTTACCGTAAGAGCTTTCAACACGATGGATAGATTTTTCCGAACTTACGTACATCTGGTTGACATAGATGCTGCTACTTTCTTGCTTGGTAATGCTGCCTTGGAGTGGTTACTATTAAGAGTAGAAATGCTCCAGAATTTGATCCTCTTCACAGCAGCTTCTCTATTTGTATTTCTTCCCAAGGGATATATAGCTCCAGGGCTCGTGGGACTTTCTATGTCTTATGCACTGTCATTAACAAGGACCCAGGTTTATTATGTTCAATGGGCATGTAGATTAGAAAACTACATCATCTCTGTTGAACGAATAAAGCAATTCATGCAAATACCACAAGAGCCTCCAAAGATCGTGGAGGATAAAAGGCCACCATCTTCATGGCCTTCAAGAGGCAGGATAGAATTGCAAGCCTTGAAGGTTAGATATCGCCCAAACTCTCCATTAGTTCTGGATGGAATCACTTGCACTTTCAAAGAAGGGACTAGAGTTGGCATTGTAGGAAGAACTGGAAGTGGGAAAACTACACTTTTAAGTGCACTGTTTCGTTTAGTTGAGCCTGAAAGTGGTGAAATCCTCGTAGATGGGGTTAATATATGCTCAATTGGTCTGAAGGATTTAAGAATGAAGCTGAGCATCATCCCTCAGGAACCCATTCTTTTCAAGGGTAGCGTTCGAACCAACTTGGATCCAGTCGGCCAATATTCCGATGAAGAGATATGGAAGGCTTTAGAGAAGTGTCAGCTCAAGGAGGCAATAAGTAGTCTACCAAATCTACTGGACTCATCAGTAAGTGATGAAGGTCAGAATTGGAGCGTGGGGCAACGGCAATTGTTTTGCCTTGGAAGAGTTCTTCTAAAAAGGAATAGAATTCTTGTTTTAGACGAAGCAACAGCTTCCATTGATTCTGCTACAGATGTTATCCTACAAAGGATCATCAGGCAGGAATTTTCTGAATGCACAGTAATAACTGTGGCTCACAGAGTTCCAACAGTTATAGACAGTGACATGGTCATGGTTCTTTCCTATGGTAAATTGGTGGAGTATGATGAACCTTCAAAGCTTATGGAAACTAATTCCACTGCATTCTCTAAGTTGGTTGCCGAATACTGGGCCAGTTGCAGGAAGAACTCGTTCCAAAGAATATG 4010 0.4017 MASFWSSHGGFWWICEEESNMASFCIQRTIIDVSFLLLLCAFRNHGYFVSEHYPNDTMVEPLLDEKVRKRRTELSQANFLSELTLSWINPLLSLGYSKPLALEDIPPLDSKDKVDLSYQKFADEWESLLRGSSSNSAENLVLRAMARVFFRENIFIAICALLRSICGAISPLILFAFVSYSSGNEDSIHEGLVILGCLILAKLVETLCQRYWYFNSRRSGMRMRSALMVAVYGKLLKLSSLGRTRHSTGEIVNYIAVDAYRMGEFLWWFHSGWSLALQLFLAIAVLFWVVGLGALPGLVLLFLCGIFNVPFAQKLKKCQSEILKSQDERLRSTSEILNNMKLIKLQSWEDEFKNLVESLRAREFQWLGETQYTKVYSSILFFISPTIICAVILVGCTLFGSAPLTAATVFTVIATLRTMGEPVKLLPEALSAIIQVKVSFDRLNTFLLDDEIKGNETRRTLIPNSDRSIEITSANFSWDSESFTPTLKDINLDIKRGQKVAVCGPVGAGKSSLLHAILGEMPRISGTVTAQGTVAYVSQTSWIQSGTIRDNILYGKSMEETRYKEAIKACALDKDISGFSHGDLTEIGQRGLNLSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAVLFHECVMSALKEKTVILVTHQVEFLSEVDKILVLEGGCIAQGGSYEDLMTTGTKFEQLLNAHRDAIAVLDTLHENQEESPEVDTVKLVEPNGCEQDNKNCDRESCEASFQRGQLTQEEQREMGDAGWKPFLDYVFISKGLLPLLLSSTALIGFIFFLASSSYWLALAIQIPKISAGMLVGVYSGLSMLSTIFIYLRSYWIALLGLKASKAFFCGFTHAIFNAPMSFFDSTPVGRILTRASSDMGTLDVDIPFAIIYVAHTVVEFLTGIGIMASVTWQVLIIGILVMIAAKYIKDYYQASARELVRINGTTKAPVVNYAAETSAGVVTVRAFNTMDRFFRTYVHLVDIDAATFLLGNAALEWLLLRVEMLQNLILFTAASLFVFLPKGYIAPGLVGLSMSYALSLTRTQVYYVQWACRLENYIISVERIKQFMQIPQEPPKIVEDKRPPSSWPSRGRIELQALKVRYRPNSPLVLDGITCTFKEGTRVGIVGRTGSGKTTLLSALFRLVEPESGEILVDGVNICSIGLKDLRMKLSIIPQEPILFKGSVRTNLDPVGQYSDEEIWKALEKCQLKEAISSLPNLLDSSVSDEGQNWSVGQRQLFCLGRVLLKRNRILVLDEATASIDSATDVILQRIIRQEFSECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMETNSTAFSKLVAEYWASCRKNSFQRI 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02305 1336 Pfam ABC transporter 487 621 IPR003439 GO:0005524
Bva02g02305 1336 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 32 1332 - -
Bva02g02305 1336 Pfam ABC transporter 1105 1253 IPR003439 GO:0005524
Bva02g02305 1336 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 154 435 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g02305 1336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 460 692 IPR027417 -
Bva02g02305 1336 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 775 1036 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g02305 1336 SUPERFAMILY ABC transporter transmembrane region 774 1070 IPR036640 GO:0005524|GO:0016021
Bva02g02305 1336 SUPERFAMILY ABC transporter transmembrane region 142 449 IPR036640 GO:0005524|GO:0016021
Bva02g02305 1336 CDD ABC_6TM_ABCC_D1 155 443 IPR044746 GO:0140359
Bva02g02305 1336 CDD ABC_6TM_ABCC_D2 774 1063 IPR044726 GO:0140359
Bva02g02305 1336 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 32 1332 - -
Bva02g02305 1336 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 469 692 IPR003439 GO:0005524
Bva02g02305 1336 Gene3D - 444 712 IPR027417 -
Bva02g02305 1336 ProSitePatterns ABC transporters family signature. 594 608 IPR017871 GO:0005524
Bva02g02305 1336 SMART AAA_5 1114 1306 IPR003593 -
Bva02g02305 1336 SMART AAA_5 496 669 IPR003593 -
Bva02g02305 1336 Gene3D - 1071 1323 IPR027417 -
Bva02g02305 1336 Gene3D ABC transporter type 1, transmembrane domain 142 443 IPR036640 GO:0005524|GO:0016021
Bva02g02305 1336 Pfam ABC transporter transmembrane region 154 417 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g02305 1336 Pfam ABC transporter transmembrane region 807 1031 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva02g02305 1336 CDD ABCC_MRP_domain2 1086 1306 - -
Bva02g02305 1336 CDD ABCC_MRP_domain1 469 668 - -
Bva02g02305 1336 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1090 1322 IPR003439 GO:0005524
Bva02g02305 1336 Gene3D ABC transporter type 1, transmembrane domain 738 1069 IPR036640 GO:0005524|GO:0016021
Bva02g02305 1336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1078 1315 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02305 Bva-Chr2 22809218 22815552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02305 469 683 Calmodulin-binding Proteins AT2G36910 28.384 1.11e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02305 - - qsu:112008820 1833.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02305 02 22809218 22815552 Bva02g02305 02 22809218 22815552 ECH