Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02302 ATGATGGGAAAGCCTGAGCTTCTTCATGGAACAATTGAAGCTACCATTTTCAATGCCACACCTTACTCTCCTGCATTTTCCTTCAATTGTTTCTGTGCAAATGGCAAGCCTGCTTATGTTACCATCAAGATAAACAACAAGAAGGTGGCAAAGACGAGTGAAGAACACGACCATGTCTGGAATCAAACTTTTCAGATTCAATGCGCTCATCCAGCTGATTCAGTAATCACCATTACACTGAAAACATCATGCTCCATACTGGGGAAGTTCCATATCCAGCCCCAGCAGCTATTGAAGGAAGCAAGTTTGATCAACGGTTTCTTTCCTCTCCACATGGATAATGGAAAGCCCAACCCGCAACTCAAGCTGAGGCTTTTATTATGGTTCAAGCCTGCAGAATTGGAACCAAGCTGGGCAAAACTACTAAGCAGTGGAGAGTATCAAGGGCTAAAGAATGCTACATTTCCAAAAAGGTCAAACTGTGAGGTCAAGCTTTACCATGATGCTCACCATTCTTCTACTTTCCAACCTCCTTTTAATCTTCGTGGGTCTCCAAGAAAGCTGTGGGAAGATGTGTATAAAGCCATTGAGGGTGCAAAGTATTTGATTTACATTGCAGGGTGGTCCTTCAATCCCAAGATGACTCTGGTTAGAGACCCTGAAACAGAAATTCCACACGCAAGAGGAGTAAAGCTAGGTGAGCTATTAAAGAAGAAGGCAGAGGAAGGAGTGGCAATAAGGCTAATGCTTTGGGATGATGAAACTTCTTTGCCCTTTATTAAGAACAAAGGTGTGATGAAAACCCATGATGAGGAAACTTTTGCTTATTTCAAACACACAAAAGTAATATGCAGAAAGTGTCAAAGATTGCACAATAAGCTCCCCACACTGTTTGCTCACCATCAGAAAACCATTAGCGTGGACACCAAGGTACCCAATTCGGCAAATGACAGAGAGATTATGAGTTTTGTTGGCGGGTTAGATTTGTGTGATGGCCGGTACGATACAGAGCAACATTCATTGTTTCAAACACTTAACATGGAATCCCATTGTTATGATTTCTATCAGACAAATATTGCAGGAGCTAGCCTTAACAAAGGAGGGCCAAGAGAACCTTGGCACGATTCCCATGCTTGTGTTACTGGTGAAGCAGCTTGGGATGTGTTAACCAACTTTGAGCAAAGATGGACTAAGCAATGTGATTCTTCCCTTTTAGTCCCAGCTGCTACCTTAGCCAATCTCTTTCCCTCAAGCACAGTGCCCTTTAAGAGGGATTGGAAAGTTCAAGTGTATAGGTCAATTGACCATGTGTCTGCTAGCCAATTGTCCAGAAAGTTAACTGTGGAAAGGAGCATCCACGATGCCTATGTTGAAGCAATTAGGCGTGCTGAAAGGTTTATATACATAGAAAACCAGTACTTCATTGGAGGGTGTCACCTGTGGGAGAAAGACACGCATTGTGGCTGCGGAAATTTGATTCCTATAGAGATTGCACTTAAGGTGGTTAGTAAGATTAAAGCGAAGGAGAGATTTGCAGTGTATATTGTGATTCCAATGTGGCCAGAAGGGTTGCCTGAAAGTGAACCAGTTCAAGATATATTGCATTGGACTAGAGAAACAATGGGCATGATGTATAGGTTTATTGGAGAAGCTATAAAAGAAAGTGGGGAGCCAGGGCACCCAAGAGActacttgaattttttttgccttGCAAATAGGGAACACATGGGAAAACACGAGTATCTTCCTCCACATTCTCTTCACCCTCAAACACATTACTGGAATGCCCAAAAGAATAGAAGGTTCATGGTTTATGTTCACTCCAAGATCATGATAGTGGACGACGTATATATTCTAATAGGATCAGCAAATGTGAACCAAAGATCCATGGATGGGCAAAGGGACACTGAGATTGCCATGGGATGCTATCAGTATGCAGATGGAACTGATAACAAAATGAAGCGTGGAGATATTCATGCATACAGAATGTCACTGTGGTACGAACACACTGGTCTTGCTGAGGAGTTGTTCTTGGAGCCAGAAAGCCTGGAATGTGTGAAGAGGGTGACTGGCATTGGAGATCAGATGTGGGAAATTTACAACAACGAAGAGGTTGTGGATATGGAAGGGGTGCACCTGGTAACTTACCCTGTCAAGGTAACACAAGAGGGTTCTGTGGAGGACCTAATTGAAGGTGGAGGTCATTTTCCTGATACAAAATCTCTCATAAAGGGAAAGAGGTCAAAACTGCTACCTCCTGTCTGTACTACCTA 2273 0.4259 MMGKPELLHGTIEATIFNATPYSPAFSFNCFCANGKPAYVTIKINNKKVAKTSEEHDHVWNQTFQIQCAHPADSVITITLKTSCSILGKFHIQPQQLLKEASLINGFFPLHMDNGKPNPQLKLRLLLWFKPAELEPSWAKLLSSGEYQGLKNATFPKRSNCEVKLYHDAHHSSTFQPPFNLRGSPRKLWEDVYKAIEGAKYLIYIAGWSFNPKMTLVRDPETEIPHARGVKLGELLKKKAEEGVAIRLMLWDDETSLPFIKNKGVMKTHDEETFAYFKHTKVICRKCQRLHNKLPTLFAHHQKTISVDTKVPNSANDREIMSFVGGLDLCDGRYDTEQHSLFQTLNMESHCYDFYQTNIAGASLNKGGPREPWHDSHACVTGEAAWDVLTNFEQRWTKQCDSSLLVPAATLANLFPSSTVPFKRDWKVQVYRSIDHVSASQLSRKLTVERSIHDAYVEAIRRAERFIYIENQYFIGGCHLWEKDTHCGCGNLIPIEIALKVVSKIKAKERFAVYIVIPMWPEGLPESEPVQDILHWTRETMGMMYRFIGEAIKESGEPGHPRDYLNFFCLANREHMGKHEYLPPHSLHPQTHYWNAQKNRRFMVYVHSKIMIVDDVYILIGSANVNQRSMDGQRDTEIAMGCYQYADGTDNKMKRGDIHAYRMSLWYEHTGLAEELFLEPESLECVKRVTGIGDQMWEIYNNEEVVDMEGVHLVTYPVKVTQEGSVEDLIEGGGHFPDTKSLIKGKRSKLLPPVCTT 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02302 757 SUPERFAMILY Phospholipase D/nuclease 419 686 - -
Bva02g02302 757 PANTHER PHOSPHOLIPASE D ALPHA 4 757 - -
Bva02g02302 757 Gene3D Endonuclease Chain A 169 417 - -
Bva02g02302 757 Pfam Phospholipase D Active site motif 605 629 IPR001736 GO:0003824
Bva02g02302 757 Pfam Phospholipase D Active site motif 297 333 IPR001736 GO:0003824
Bva02g02302 757 Pfam C2 domain 38 109 IPR000008 -
Bva02g02302 757 Gene3D Endonuclease Chain A 418 646 - -
Bva02g02302 757 PANTHER PHOSPHOLIPASE D 4 757 IPR015679 -
Bva02g02302 757 SUPERFAMILY Phospholipase D/nuclease 148 433 - -
Bva02g02302 757 PIRSF PLD_plant 4 757 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bva02g02302 757 Pfam Phospholipase D C terminal 674 746 IPR024632 -
Bva02g02302 757 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 296 333 IPR001736 GO:0003824
Bva02g02302 757 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 125 IPR035892 -
Bva02g02302 757 SMART pld_4 602 629 IPR001736 GO:0003824
Bva02g02302 757 SMART pld_4 296 333 IPR001736 GO:0003824
Bva02g02302 757 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 602 629 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02302 Bva-Chr2 22786230 22788902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02302 30 757 Phospholipase D Gene Family (Wang group) AT1G55180 64.161 0.0 988
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02302 K01115 - gmx:100807431 1301.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02152 08 14177997 14181246 Bva02g02302 02 22786230 22788902 BWGD
Bva02g02302 02 22786230 22788902 Bva02g02302 02 22786230 22788902 ECH