Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02282 ATGTTtcagcaacaacaacagctGCATCAACCAGTGGTAGAAGAGAACATGTCTAATTTGACTTCTGCATCTGGCGAAGCAAGTGTTTCTTCGGGCAACAGAAACGAAATTGGTACCAATTATTCTCAACAGTACTTTGTTAATCCACCACCAGCTCAAACTCAGCCACcagtgaagaagaagagaaaccTTCCAGGCAACCCAGaCCCAGATGCTGAAGTTATCGCCTTGTCCCCCAAGAGTCTCTTGGCAACAAACAGGTTCATTTGTGAGATCTGTAACAAAGGATTTCAGAGAGATCAGAATCTTCAACTTCACAAAAGAGGGCATAATCTGCCATGGAAGCTGAAGCAGAGAACAAACAAAGAGATAAGGAAGAAGGTGTATGTGTGCCCAGAGCCCACTTGTGTGCACCATGACCCGTCAAGGGCCCTTGGGGACCTAACTGGTATCAAGAAGCACTTCTGCAGAAAACACGGTGAGAAGAAGTGGAAATGTGACAAGTGCTCTAAGAGGTATGCAGTTCAATCAGATTGGAAAGCTCATTCAAAAACCTGTGGCACTAGGGAGTACAGATGTGACTGTGGAACCCTCTTCTCAAGGAGGGACAGTTTCACAACCCACAGAGCGTTCTGTGATGCATTAGCAGAGGAGAGTGCAAGAGCAATCACGGGCACAGCAAACGCACTTCTTCCTTCTCAACCAGGGTCTTCTGCAATAAACCTACAACCCCATTTCAATCCCCAAGATCTCCACGCTTTCACATTGAAAAAGGAGCAACCAAGTTTCAATCTTAGACCAGAAATACCTCCTTGGCTAACCTGCCCAGGCCCACCCGCTATTGATCTCTCCTCTAATTCATCAATTTTCCCAACAAGATTGGATCAGGAATTTTCAGTAACACAACACGAGCAAGATCTAAACCTCCATGAAATcccaaaccctaaccctagcCTTGGACCCACTTACCCTGCCTTCCAACCGGCGGCTTCCCCGCACATGTCAGCTACAGCGCTGCTGCAGAAAGCAGCTCAAATGGGTGCAACCATGAGCAAAACTGGCTCCTCACCAGCCATGATTAGGACCCACCAGCAGGCTCACGTGTCTGCTGATCCTGCCAAAAATTCAACTTCAAGTGgtaattttgttatgaatttGTCTTCACGTGAGGATCAGATGACCACCAGTACTGGGTTTGGCCATGGCTTGGCTCCATTTGGGAATAAAGCTGCTGCTTCTGCAGCAATCACTGGTACTGGTGCCCCCTCAGGTGTTCCTTCATCCTTTCTTCATGACGTGATGAActctttctcttctgcttCTGGGTTTGAAGGAACTTCTTTTGAGGATGCCTTTGGTGGcattttgaattcaaagaaTACCAAAGATACAAACTTTAACGATGCCCTCCGGAGAACAACCTCCACCACTCGTCTAGGTAGCGCCGCCGATGATGGCGGTGGCGGAAATGAAGGATTGACAAGGGATTTCTTGGGTCTGCGGCCATTGTCTCATAGTGATATTCTGAGCATTGCTGGTATTGGAAACTGCACGAGCACTTCCACCTCCCTTGATCAGCAAAAGCCATGGCAAGGTTA 1598 0.4468 MFQQQQQLHQPVVEENMSNLTSASGEASVSSGNRNEIGTNYSQQYFVNPPPAQTQPPVKKKRNLPGNPDPDAEVIALSPKSLLATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRTNKEIRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFTTHRAFCDALAEESARAITGTANALLPSQPGSSAINLQPHFNPQDLHAFTLKKEQPSFNLRPEIPPWLTCPGPPAIDLSSNSSIFPTRLDQEFSVTQHEQDLNLHEIPNPNPSLGPTYPAFQPAASPHMSATALLQKAAQMGATMSKTGSSPAMIRTHQQAHVSADPAKNSTSSGNFVMNLSSREDQMTTSTGFGHGLAPFGNKAAASAAITGTGAPSGVPSSFLHDVMNSFSSASGFEGTSFEDAFGGILNSKNTKDTNFNDALRRTTSTTRLGSAADDGGGGNEGLTRDFLGLRPLSHSDILSIAGIGNCTSTSTSLDQQKPWQG 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02282 532 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 19 516 - -
Bva02g02282 532 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Bva02g02282 532 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 19 516 - -
Bva02g02282 532 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 110 IPR013087 -
Bva02g02282 532 MobiDBLite consensus disorder prediction 42 69 - -
Bva02g02282 532 SUPERFAMILY beta-beta-alpha zinc fingers 87 184 IPR036236 -
Bva02g02282 532 Gene3D Classic Zinc Finger 142 222 - -
Bva02g02282 532 Gene3D Classic Zinc Finger 69 134 - -
Bva02g02282 532 SMART c2h2final6 88 110 IPR013087 -
Bva02g02282 532 SMART c2h2final6 129 159 IPR013087 -
Bva02g02282 532 SMART c2h2final6 164 184 IPR013087 -
Bva02g02282 532 Pfam Zinc-finger double-stranded RNA-binding 88 110 IPR022755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02282 Bva-Chr2 22658892 22661739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02282 17 532 IDZ Gene Family AT3G13810 47.150 1.03e-140 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva02g02282 zf-C2H2_jaz 5.5e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02282 K25870 - jre:109012370 758.059